Evidence map›Paper›PMID 29181379›Full record

ArticleFrontiers in cardiovascular medicine2017

Molecular Autopsy for Sudden Death in the Young: Is Data Aggregation the Key?

Manuel Rueda, Jennifer L Wagner, Tierney C Phillips, Sarah E Topol, Evan D Muse, Jonathan R Lucas, Glenn N Wagner, Eric J Topol, Ali Torkamani

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in cardiovascular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Guideline
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  6. Review
  7. Article
  8. Article
  9. European Heart Rhythm Association (EHRA)/Heart Rhythm Society (HRS)/Asia Pacific Heart Rhythm Society (APHRS)/Latin American Heart Rhythm Society (LAHRS) Expert Consensus Statement on the state of genetic testing for cardiac diseases.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2022
    Article
  10. Article
  11. Review
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  14. Article
  15. "Donating our bodies to science": A discussion about autopsy and organ donation in Turner syndrome.American journal of medical genetics. Part C, Seminars in medical genetics · 2019
    Review
  16. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Manuel RuedaThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Jennifer L WagnerThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Tierney C PhillipsThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Sarah E TopolThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Evan D MuseThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Jonathan R LucasMedical Examiner Department, San Diego County, San Diego, CA, United States.
Glenn N WagnerMedical Examiner Department, San Diego County, San Diego, CA, United States.
Eric J TopolThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Ali TorkamaniThe Scripps Translational Science Institute, Scripps Health, The Scripps Research Institute, La Jolla, CA, United States.
Scripps Health · USScripps Research Institute · USDade County Medical Examiner Department · USScripps Clinic · US

Funding

SCRIPPS TRANSLATIONAL SCIENCE INSTITUTE (UL1)UL1RR025774 · NCRR · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2008 to 2011
$16.3M
Scripps Genome ADVISER: Annotation and Distributed Variant Interpretation SERverU01HG006476 · NHGRI · SCRIPPS HEALTH · PI TORKAMANI, ALI · 2012 to 2015
$1.1M
NCRR NIH HHS UL1 RR025774NHGRI NIH HHS U01 HG006476
6 · The paper itself

Abstract

The Scripps molecular autopsy study seeks to incorporate genetic testing into the postmortem examination of cases of sudden death in the young (<45 years old). Here, we describe the results from the first 2 years of the study, which consisted of whole exome sequencing (WES) of a cohort of 50 cases predominantly from San Diego County. Apart from the individual description of cases, we analyzed the data at the cohort-level, which brought new perspectives on the genetic causes of sudden death. We investigated the advantages and disadvantages of using WES compared to a gene panel for cardiac disease (usually the first genetic test used by medical examiners). In an attempt to connect complex clinical phenotypes with genotypes, we classified samples by their genetic fingerprint. Finally, we studied the benefits of analyzing the mitochondrial DNA genome. In this regard, we found that half of the cases clinically diagnosed as sudden infant death syndrome had an increased ratio of heteroplasmic variants, and that the variants were also present in the mothers. We believe that community-based data aggregation and sharing will eventually lead to an improved classification of variants. Allele frequencies for the all cases can be accessed

Indexed as

gene panelmitochondrial DNAmolecular autopsysudden cardiac deathwhole exome sequencing

Identifiers

PMID29181379
PMCPMC5694161
OpenAlexW2768050202

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.