Evidence map›Paper›PMID 29180822›Full record

ArticleNature cell biology2017

Damage-induced lncRNAs control the DNA damage response through interaction with DDRNAs at individual double-strand breaks.

Flavia Michelini, Sethuramasundaram Pitchiaya, Valerio Vitelli, Sheetal Sharma, Ubaldo Gioia, Fabio Pessina, Matteo Cabrini, Yejun Wang, Ilaria Capozzo, Fabio Iannelli and 5 more

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 240 papers.

0numbers the graph read from it
0cells of the map it votes in
240citing papers in PubMed
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

240 citing papers in PubMed, 393 citations in OpenAlex.

  1. Article
  2. Mechanisms and disease relevance of DNA break repair pathway choice.Nature reviews. Molecular cell biology · 2026
    Review
  3. Article
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  5. Review
  6. Genomic repeats for single-cell molecular recording.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. iScience · 2026
    Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Molecular evolution of animal aging.The EMBO journal · 2026
    Review
  16. DNA topological regulation in RNA polymerase II transcription.Cellular & molecular biology letters · 2026
    Review
  17. Review
  18. Article
  19. Review
  20. Article

180 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Flavia MicheliniIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Sethuramasundaram PitchiayaSingle Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, USA.ORCID http://orcid.org/0000-0003-2529-5186
Valerio VitelliIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Sheetal SharmaIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Ubaldo GioiaIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.ORCID http://orcid.org/0000-0002-4993-5283
Fabio PessinaIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Matteo CabriniIstituto di Genetica Molecolare, CNR - Consiglio Nazionale delle Ricerche, Pavia 27100, Italy.
Yejun WangMechanobiology Institute, National University Singapore, 117411 Singapore, Singapore.
Ilaria CapozzoIstituto di Genetica Molecolare, CNR - Consiglio Nazionale delle Ricerche, Pavia 27100, Italy.
Fabio IannelliIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Valentina MattiIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Sofia FranciaIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
G V ShivashankarIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.
Nils G WalterSingle Molecule Analysis Group and Center for RNA Biomedicine, Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, USA.
Fabrizio d'Adda di FagagnaIFOM-The FIRC Institute of Molecular Oncology, Milan 20139, Italy.ORCID http://orcid.org/0000-0002-9603-5966
IFOM · ITIstituto di Genetica Molecolare · ITNational University of Singapore · SGUniversity of Michigan · US

Funding

U-turn of the Hepatitis Delta Virus RibozymeR01GM062357 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2001 to 2019
$5.8M
Spliceosome Mechanism Dissected at the Single Molecule LevelR01GM098023 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2012 to 2015
$1.3M
HCV biology and inhibition visualized at the single molecule levelR21AI109791 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WALTER, NILS G · 2014 to 2015
$428k
European Research Council 322726NIAID NIH HHS R21 AI109791NIGMS NIH HHS R01 GM062357NIGMS NIH HHS R01 GM098023Telethon GGP12059Worldwide Cancer Research 14-1331
6 · The paper itself

Abstract

The DNA damage response (DDR) preserves genomic integrity. Small non-coding RNAs termed DDRNAs are generated at DNA double-strand breaks (DSBs) and are critical for DDR activation. Here we show that active DDRNAs specifically localize to their damaged homologous genomic sites in a transcription-dependent manner. Following DNA damage, RNA polymerase II (RNAPII) binds to the MRE11-RAD50-NBS1 complex, is recruited to DSBs and synthesizes damage-induced long non-coding RNAs (dilncRNAs) from and towards DNA ends. DilncRNAs act both as DDRNA precursors and by recruiting DDRNAs through RNA-RNA pairing. Together, dilncRNAs and DDRNAs fuel DDR focus formation and associate with 53BP1. Accordingly, inhibition of RNAPII prevents DDRNA recruitment, DDR activation and DNA repair. Antisense oligonucleotides matching dilncRNAs and DDRNAs impair site-specific DDR focus formation and DNA repair. We propose that DDR signalling sites, in addition to sharing a common pool of proteins, individually host a unique set of site-specific RNAs necessary for DDR activation.

Indexed as

DNA Breaks, Double-StrandedDNA DamageDNA RepairAcid Anhydride HydrolasesAnimalsATP-Binding Cassette TransportersCell Cycle ProteinsCell-Free SystemCell LineDNA-Binding ProteinsMiceModels, BiologicalMRE11 Homologue ProteinNuclear ProteinsOligonucleotides, AntisenseRNA, Long NoncodingAcid Anhydride HydrolasesATP-Binding Cassette TransportersCell Cycle ProteinsDNA-Binding ProteinsMre11a protein, mouseMRE11 Homologue ProteinNijmegen breakage syndrome 1 protein, mouseNuclear ProteinsOligonucleotides, AntisenseRad50 protein, mouseRNA, Long NoncodingRNA Polymerase IITrp53bp1 protein, mouseTumor Suppressor p53-Binding Protein 1

Identifiers

PMID29180822
PMCPMC5714282
OpenAlexW2771049305

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.