Evidence map›Paper›PMID 29180615›Full record

ArticleNature communications2017

Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes.

Demian Burguera, Yamile Marquez, Claudia Racioppi, Jon Permanyer, Antonio Torres-Méndez, Rosaria Esposito, Beatriz Albuixech-Crespo, Lucía Fanlo, Ylenia D'Agostino, Andre Gohr and 12 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

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  18. AnDevelopment (Cambridge, England) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 4 countries.

Demian BurgueraCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain.
Yamile MarquezCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain.
Claudia RacioppiStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Jon PermanyerCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain.
Antonio Torres-MéndezCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain.ORCID http://orcid.org/0000-0002-1241-8629
Rosaria EspositoStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Beatriz Albuixech-CrespoDepartment of Genetics, School of Biology, and Institut de Biomedicina (IBUB), University of Barcelona, Diagonal 643, Barcelona, 08028, Spain.
Lucía FanloInstituto de Biología Molecular de Barcelona, CSIC, Parc Científic de Barcelona, Baldiri Reixac 20, Barcelona, 08028, Spain.
Ylenia D'AgostinoStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Andre GohrCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain.
Enrique Navas-PerezDepartment of Genetics, School of Biology, and Institut de Biomedicina (IBUB), University of Barcelona, Diagonal 643, Barcelona, 08028, Spain.
Ana RiesgoDepartment of Life Sciences, Natural History Museum of London, Cromwell Road, SW7 5BD, London, UK.
Claudia CuomoStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Giovanna BenvenutoStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.ORCID http://orcid.org/0000-0001-7155-2935
Lionel A ChristiaenCenter for Developmental Genetics, Department of Biology, New York University, New York, NY, 1003, USA.ORCID http://orcid.org/0000-0001-5930-5667
Elisa MartíInstituto de Biología Molecular de Barcelona, CSIC, Parc Científic de Barcelona, Baldiri Reixac 20, Barcelona, 08028, Spain.
Salvatore D'AnielloStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Antonietta SpagnuoloStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.
Filomena RistoratoreStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy.ORCID http://orcid.org/0000-0002-6023-9537
Maria Ina ArnoneStazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy. miarnone@szn.it.
Jordi Garcia-FernàndezDepartment of Genetics, School of Biology, and Institut de Biomedicina (IBUB), University of Barcelona, Diagonal 643, Barcelona, 08028, Spain. jordigarcia@ub.edu.ORCID http://orcid.org/0000-0001-5677-5970
Manuel IrimiaCentre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Dr Aiguader 88, Barcelona, 08003, Spain. mirimia@gmail.com.ORCID http://orcid.org/0000-0002-2179-2567
Stazione Zoologica Anton Dohrn · ITUniversitat Pompeu Fabra · ESUniversitat de Barcelona · ESInstitut de Biologia Molecular de Barcelona · ESMuseum of London · GBNew York University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epithelial-mesenchymal interactions are crucial for the development of numerous animal structures. Thus, unraveling how molecular tools are recruited in different lineages to control interplays between these tissues is key to understanding morphogenetic evolution. Here, we study Esrp genes, which regulate extensive splicing programs and are essential for mammalian organogenesis. We find that Esrp homologs have been independently recruited for the development of multiple structures across deuterostomes. Although Esrp is involved in a wide variety of ontogenetic processes, our results suggest ancient roles in non-neural ectoderm and regulating specific mesenchymal-to-epithelial transitions in deuterostome ancestors. However, consistent with the extensive rewiring of Esrp-dependent splicing programs between phyla, most developmental defects observed in vertebrate mutants are related to other types of morphogenetic processes. This is likely connected to the origin of an event in Fgfr, which was recruited as an Esrp target in stem chordates and subsequently co-opted into the development of many novel traits in vertebrates.

Indexed as

AnimalsBiological EvolutionCRISPR-Cas SystemsEmbryonic DevelopmentEpithelial-Mesenchymal TransitionExonsFemaleGene Expression Regulation, DevelopmentalGene Knockdown TechniquesLanceletsMaleMutationRNA-Binding ProteinsRNA SplicingSequence Homology, Amino AcidSignal TransductionRNA-Binding Proteins

Identifiers

PMID29180615
PMCPMC5703972
OpenAlexW2770485009

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.