Evidence map›Paper›PMID 29180514›Full record

ArticleJournal of cell science2018

Protein localization screening

Fan Tu, Jakub Sedzinski, Yun Ma, Edward M Marcotte, John B Wallingford

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  8. Article
  9. Pleiotropy of autism-associated chromatin regulators.Development (Cambridge, England) · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. Development of a multiciliated cell.Current opinion in cell biology · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Aquatic models of human ciliary diseases.Genesis (New York, N.Y. : 2000) · 2021
    Review
  18. Review
  19. Article
  20. The neurodevelopmental disorder risk geneDevelopment (Cambridge, England) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Fan TuDept. of Molecular Biosciences, University of Texas at Austin, Austin, TX 78712, USA.
Jakub SedzinskiDept. of Molecular Biosciences, University of Texas at Austin, Austin, TX 78712, USA.
Yun MaDept. of Molecular Biosciences, University of Texas at Austin, Austin, TX 78712, USA.ORCID 0000-0002-4672-3584
Edward M MarcotteDept. of Molecular Biosciences, University of Texas at Austin, Austin, TX 78712, USA.
John B WallingfordDept. of Molecular Biosciences, University of Texas at Austin, Austin, TX 78712, USA Wallingford@austin.utexas.edu.ORCID 0000-0002-6280-8625
The University of Texas at Austin · USSun Yat-sen University · CNUniversity of Copenhagen · DK

Funding

Mapping the CPLANE interactome, an extensive protein interaction network underlying human ciliopathiesR01HD085901 · NICHD · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE, John B Wallingford · 2016 to 2026
$6.2M
Proteomics and model organism humanization to decode human geneticsR35GM122480 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EDWARD M MARCOTTE · 2017 to 2026
$5.4M
Development and function in mucociliary epitheliaR01HL117164 · NHLBI · UNIVERSITY OF TEXAS AT AUSTIN · PI John B Wallingford · 2013 to 2026
$4.7M
Next-Generation Proteomics: Massively Parallel Single-Molecule Protein IdentificaDP1GM106408 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI MARCOTTE, EDWARD M · 2012 to 2016
$3.8M
NHLBI NIH HHS R01 HL117164NICHD NIH HHS R01 HD085901NIGMS NIH HHS DP1 GM106408NIGMS NIH HHS R35 GM122480
6 · The paper itself

Abstract

Multiciliated cells (MCCs) drive fluid flow in diverse tubular organs and are essential for the development and homeostasis of the vertebrate central nervous system, airway and reproductive tracts. These cells are characterized by dozens or hundreds of motile cilia that beat in a coordinated and polarized manner. In recent years, genomic studies have not only elucidated the transcriptional hierarchy for MCC specification but also identified myriad new proteins that govern MCC ciliogenesis, cilia beating and cilia polarization. Interestingly, this burst of genomic data has also highlighted that proteins with no obvious role in cilia do, in fact, have important ciliary functions. Understanding the function of proteins with little prior history of study presents a special challenge, especially when faced with large numbers of such proteins. Here, we define the subcellular localization in MCCs of ∼200 proteins not previously implicated in cilia biology. Functional analyses arising from the screen provide novel links between actin cytoskeleton and MCC ciliogenesis.

Indexed as

AnimalsAxonemeBasal BodiesCell MovementCell PolarityCiliaDiseaseFemaleHumansMyosinsOrganogenesisProtein TransportXenopus laevisXenopus ProteinsMyosinsXenopus ProteinsCiliaImagingMulticiliated cellMyosin 5cSt5

Identifiers

PMID29180514
PMCPMC5826043
OpenAlexW2768238467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.