Evidence map›Paper›PMID 29180510›Full record

ArticleMolecular and cellular biology2018

mRNA Processing Factor CstF-50 and Ubiquitin Escort Factor p97 Are BRCA1/BARD1 Cofactors Involved in Chromatin Remodeling during the DNA Damage Response.

Danae Fonseca, Jorge Baquero, Michael R Murphy, Gamage Aruggoda, Sophia Varriano, Carmen Sapienza, Oksana Mashadova, Shadaqur Rahman, Frida E Kleiman

Open access · hybridAbstract read
In one paragraph

Article in Molecular and cellular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Alternative polyadenylation: methods, mechanism, function, and role in cancer.Journal of experimental & clinical cancer research : CR · 2021
    Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Danae FonsecaChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Jorge BaqueroChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Michael R MurphyChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Gamage AruggodaChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Sophia VarrianoChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Carmen SapienzaFels Institute for Cancer Research and Molecular Biology, Temple University School of Medicine, Philadelphia, Pennsylvania, USA.
Oksana MashadovaChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Shadaqur RahmanChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA.
Frida E KleimanChemistry Department, Hunter College and Biochemistry Program, Graduate Center, City University of New York, New York, New York, USA fkleiman@hunter.cuny.edu.
City University of New York · USThe Graduate Center, CUNY · USHunter College · USTemple University · US

Funding

RISE Program Hunter College Option IIIR25GM060665 · NIGMS · HUNTER COLLEGE · PI ORTIZ, BENJAMIN D.,, SERRANO, PETER A · 2000 to 2022
$22.8M
Role of the mRNA 3’ processing factor CstF-50 in regulating the BRCA1/BARD1 E3 ubiquitin ligase activity during the DNA damage responseR21CA204610 · NCI · HUNTER COLLEGE · PI KLEIMAN, FRIDA E · 2017 to 2018
$373k
NCI NIH HHS R21 CA204610NIGMS NIH HHS R25 GM060665
6 · The paper itself

Abstract

The cellular response to DNA damage is an intricate mechanism that involves the interplay among several pathways. In this study, we provide evidence of the roles of the polyadenylation factor cleavage stimulation factor 50 (CstF-50) and the ubiquitin (Ub) escort factor p97 as cofactors of BRCA1/BARD1 E3 Ub ligase, facilitating chromatin remodeling during the DNA damage response (DDR). CstF-50 and p97 formed complexes with BRCA1/BARD1, Ub, and some BRCA1/BARD1 substrates, such as RNA polymerase (RNAP) II and histones. Furthermore, CstF-50 and p97 had an additive effect on the activation of the ubiquitination of these BRCA1/BARD1 substrates during DDR. Importantly, as a result of these functional interactions, BRCA1/BARD1/CstF-50/p97 had a specific effect on the chromatin structure of genes that were differentially expressed. This study provides new insights into the roles of RNA processing, BRCA1/BARD1, the Ub pathway, and chromatin structure during DDR.

Indexed as

Chromatin Assembly and DisassemblyDNA DamageDNA RepairAdenosine TriphosphatasesBRCA1 ProteinCleavage Stimulation FactorDNA-Binding ProteinsHistonesHumansmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsRNA, MessengerRNA Polymerase IITumor Suppressor ProteinsUbiquitinUbiquitinationAdenosine TriphosphatasesBARD1 protein, humanBRCA1 ProteinBRCA1 protein, humanCleavage Stimulation FactorDNA-Binding ProteinsHistonesmRNA Cleavage and Polyadenylation FactorsNuclear Proteinsp97 ATPaseRNA, MessengerRNA Polymerase IITumor Suppressor ProteinsUbiquitinUbiquitin-Protein LigasesBRCA1/BARD1chromatin remodelingCstF-50DNA damage responsehistonesp97RNA polymerase II

Identifiers

PMID29180510
PMCPMC5789026
OpenAlexW2769004510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.