Evidence map›Paper›PMID 29180453›Full record

ArticleThe Journal of biological chemistry2018

A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core.

John P O'Donnell, Laura J Byrnes, Richard B Cooley, Holger Sondermann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. The atlastin paralogs: The complexity in the tails.The Journal of cell biology · 2023
    Article
  2. Article
  3. Article
  4. Review
  5. Frontiers in neuroscience · 2020
    Article
  6. Review
  7. Identifying coupled clusters of allostery participants through chemical shift perturbations.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

John P O'DonnellFrom the Department of Molecular Medicine, Cornell University, Ithaca, New York 14853.
Laura J ByrnesFrom the Department of Molecular Medicine, Cornell University, Ithaca, New York 14853.
Richard B CooleyFrom the Department of Molecular Medicine, Cornell University, Ithaca, New York 14853.
Holger SondermannFrom the Department of Molecular Medicine, Cornell University, Ithaca, New York 14853 hs293@cornell.edu.
Cornell University · US

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
TRAINING IN MOLECULAR PHYSICS OF BIOLOGICAL SYSTEMST32GM008267 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WANG, MICHELLE D. · 1988 to 2021
$9.6M
CHEMISTRY OF BIOLOGICAL SYSTEMST32GM008500 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIN, HENING · 1996 to 2020
$5.4M
Characterization of nucleotide-dependent structural rearrangements in atlastinF31NS077650 · NINDS · CORNELL UNIVERSITY · PI BYRNES, LAURA JEAN · 2011 to 2012
$77k
NIGMS NIH HHS P41 GM103485NIGMS NIH HHS T32 GM008267NIGMS NIH HHS T32 GM008500NINDS NIH HHS F31 NS077650
6 · The paper itself

Abstract

The dynamin-related GTPase atlastin (ATL) catalyzes membrane fusion of the endoplasmic reticulum and thus establishes a network of branched membrane tubules. When ATL function is compromised, the morphology of the endoplasmic reticulum deteriorates, and these defects can result in neurological disorders such as hereditary spastic paraplegia and hereditary sensory neuropathy. ATLs harness the energy of GTP hydrolysis to initiate a series of conformational changes that enable homodimerization and subsequent membrane fusion. Disease-associated amino acid substitutions cluster in regions adjacent to ATL's catalytic site, but the consequences for the GTPase's molecular mechanism are often poorly understood. Here, we elucidate structural and functional defects of an atypical hereditary spastic paraplegia mutant, ATL1-F151S, that is impaired in its nucleotide-hydrolysis cycle but can still adopt a high-affinity homodimer when bound to a transition-state analog. Crystal structures of mutant proteins yielded models of the monomeric pre- and post-hydrolysis states of ATL. Together, these findings define a mechanism for allosteric coupling in which Phe

Indexed as

AnimalsCatalytic DomainGTP PhosphohydrolasesGuanosine TriphosphateHumansMembrane FusionSpastic Paraplegia, HereditaryGTP PhosphohydrolasesGuanosine Triphosphateallosteric regulationaxonopathydynamin-related proteinsenzyme structureGTPasehereditary spastic paraplegiamembrane fusion

Identifiers

PMID29180453
PMCPMC5767872
OpenAlexW2770431338

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.