Evidence map›Paper›PMID 29179726›Full record

ArticleRetrovirology2017

Modulation of the functional association between the HIV-1 intasome and the nucleosome by histone amino-terminal tails.

Mohamed S Benleulmi, Julien Matysiak, Xavier Robert, Csaba Miskey, Eric Mauro, Delphine Lapaillerie, Paul Lesbats, Stéphane Chaignepain, Daniel R Henriquez, Christina Calmels and 10 more

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

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  11. Targeting Epigenetics to Cure HIV-1: Lessons From (and for) Cancer Treatment.Frontiers in cellular and infection microbiology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 3 countries.

Mohamed S BenleulmiFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Julien MatysiakFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Xavier RobertMMSB-Institute of the Biology and Chemistry of Proteins, UMR 5086 CNRS-Lyon 1 University, Lyon, France.
Csaba MiskeyDivision of Medical Biotechnology, Paul Ehrlich Institute, Langen, Germany.
Eric MauroFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Delphine LapaillerieFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Paul LesbatsFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Stéphane ChaignepainUMR CNRS 5248 CBMN (Chimie Biologie des Membranes et Nanoobjets), Université de Bordeaux, 33076, Bordeaux, France.
Daniel R HenriquezVirology Program, ICBM, Faculty of Medicine, University of Chile, Santiago of Chile, Chile.
Christina CalmelsFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Oyindamola OladosuDépartement de Biologie Structurale Intégrative, UDS, U596 INSERM, UMR7104 CNRS, IGBMC (Institut de Génétique et de Biologie Moléculaire et Cellulaire), Illkirch, France.
Eloïse ThierryLBPA, UMR8113, CNRS, ENS-Cachan, 94235, Cachan, France.
Oscar LeonVirology Program, ICBM, Faculty of Medicine, University of Chile, Santiago of Chile, Chile.
Marc LavigneDpt de Virologie, UMR 3569, CNRS, Institut Pasteur, Paris, France.
Marie-Line AndreolaFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France.
Olivier DelelisLBPA, UMR8113, CNRS, ENS-Cachan, 94235, Cachan, France.
Zoltán IvicsDivision of Medical Biotechnology, Paul Ehrlich Institute, Langen, Germany.
Marc RuffDépartement de Biologie Structurale Intégrative, UDS, U596 INSERM, UMR7104 CNRS, IGBMC (Institut de Génétique et de Biologie Moléculaire et Cellulaire), Illkirch, France.
Patrice GouetMMSB-Institute of the Biology and Chemistry of Proteins, UMR 5086 CNRS-Lyon 1 University, Lyon, France.
Vincent ParissiFundamental Microbiology and Pathogenicity Laboratory, UMR 5234 CNRS-University of Bordeaux, SFR TransBioMed, 146 rue Léo Saignat, Bordeaux Cedex, France. vincent.parissi@u-bordeaux.fr.
Centre National de la Recherche Scientifique · FRÉcole Normale Supérieure Paris-Saclay · FRPaul Ehrlich Institut · DEUniversité Claude Bernard Lyon 1 · FRUniversity of Chile · CL

Funding

Agence Nationale de la Recherche (FR) ANR-10-INSB-06-01Agence Nationale de la Recherche (FR) RetroSelecyAgence Nationale de Recherches sur le Sida et les Hepatites Virales (FR) AO2016Sidaction AO2016
6 · The paper itself

Abstract

backgroundStable insertion of the retroviral DNA genome into host chromatin requires the functional association between the intasome (integrase·viral DNA complex) and the nucleosome. The data from the literature suggest that direct protein-protein contacts between integrase and histones may be involved in anchoring the intasome to the nucleosome. Since histone tails are candidates for interactions with the incoming intasomes we have investigated whether they could participate in modulating the nucleosomal integration process.

resultsWe show here that histone tails are required for an optimal association between HIV-1 integrase (IN) and the nucleosome for efficient integration. We also demonstrate direct interactions between IN and the amino-terminal tail of human histone H4 in vitro. Structure/function studies enabled us to identify amino acids in the carboxy-terminal domain of IN that are important for this interaction. Analysis of the nucleosome-binding properties of catalytically active mutated INs confirmed that their ability to engage the nucleosome for integration in vitro was affected. Pseudovirus particles bearing mutations that affect the IN/H4 association also showed impaired replication capacity due to altered integration and re-targeting of their insertion sites toward dynamic regions of the chromatin with lower nucleosome occupancy.

conclusionsCollectively, our data support a functional association between HIV-1 IN and histone tails that promotes anchoring of the intasome to nucleosomes and optimal integration into chromatin.

Indexed as

Virus IntegrationCell Line, TransformedChromatinDNA, ViralHEK293 CellsHistonesHIV-1HIV IntegraseHost-Parasite InteractionsHumansNucleosomesProtein BindingChromatinDNA, ViralHistonesHIV IntegraseNucleosomesChromatineHistone tailsHIV-1IntegraseNucleosomeRetroviral integration

Identifiers

PMID29179726
PMCPMC5704366
OpenAlexW2769539926

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.