Evidence map›Paper›PMID 29179263›Full record

ArticleMolecules and cells2017

Odorant Receptors Containing Conserved Amino Acid Sequences in Transmembrane Domain 7 Display Distinct Expression Patterns in Mammalian Tissues.

Sang Eun Ryu, Tammy Shim, Ju-Yeon Yi, So Yeun Kim, Sun Hwa Park, Sung Won Kim, Gabriele V Ronnett, Cheil Moon

Open access · greenAbstract read
In one paragraph

Article in Molecules and cells, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sang Eun RyuDepartment of Cognitive and Brain Sciences, Graduate school, Daegu Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Korea.
Tammy ShimDepartment of Cognitive and Brain Sciences, Graduate school, Daegu Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Korea.
Ju-Yeon YiDepartment of Cognitive and Brain Sciences, Graduate school, Daegu Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Korea.
So Yeun KimDepartment of Cognitive and Brain Sciences, Graduate school, Daegu Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Korea.
Sun Hwa ParkDepartment of Otolaryngology-Head and Neck Surgery, The Catholic University of Korea, College of Medicine, Seoul 06591, Korea.
Sung Won KimDepartment of Otolaryngology-Head and Neck Surgery, The Catholic University of Korea, College of Medicine, Seoul 06591, Korea.
Gabriele V RonnettDepartments of Neuroscience and Neurology, The Johns Hopkins University School of Medicine, Baltimore, MD21205, USA.
Cheil MoonDepartment of Cognitive and Brain Sciences, Graduate school, Daegu Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Korea.
Daegu Gyeongbuk Institute of Science and Technology · KRCatholic University of Korea · KRJohns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian genomes are well established, and highly conserved regions within odorant receptors that are unique from other G-protein coupled receptors have been identified. Numerous functional studies have focused on specific conserved amino acids motifs; however, not all conserved motifs have been sufficiently characterized. Here, we identified a highly conserved 18 amino acid sequence motif within transmembrane domain seven (CAS-TM7) which was identified by aligning odorant receptor sequences. Next, we investigated the expression pattern and distribution of this conserved amino acid motif among a broad range of odorant receptors. To examine the localization of odorant receptor proteins, we used a sequence-specific peptide antibody against CAS-TM7 which is specific to odorant receptors across species. The specificity of this peptide antibody in recognizing odorant receptors has been confirmed in a heterologous in vitro system and a rat-based in vivo system. The CAS-TM7 odorant receptors localized with distinct patterns at each region of the olfactory epithelium; septum, endoturbinate and ectoturbinate. To our great interests, we found that the CAS-TM7 odorant receptors are primarily localized to the dorsal region of the olfactory bulb, coinciding with olfactory epithelium-based patterns. Also, these odorant receptors were ectopically expressed in the various non-olfactory tissues in an evolutionary constrained manner between human and rats. This study has characterized the expression patterns of odorant receptors containing particular amino acid motif in transmembrane domain 7, and which led to an intriguing possibility that the conserved motif of odorant receptors can play critical roles in other physiological functions as well as olfaction.

Indexed as

Amino Acid SequenceAnimalsConserved SequenceHEK293 CellsHumansMaleProtein DomainsRatsRats, Sprague-DawleyReceptors, OdorantSmellReceptors, OdorantconservedGPCRodorant receptorolfactiontransmembrane

Identifiers

PMID29179263
PMCPMC5750714
OpenAlexW2917394927

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.