Evidence map›Paper›PMID 29179261›Full record

ArticleMolecules and cells2017

Targeted Base Editing via RNA-Guided Cytidine Deaminases in Xenopus laevis Embryos.

Dong-Seok Park, Mijung Yoon, Jiyeon Kweon, An-Hee Jang, Yongsub Kim, Sun-Cheol Choi

Open access · greenAbstract read
In one paragraph

Article in Molecules and cells, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 38 citations in OpenAlex.

  1. Tyrosinase-Deficient Skin Melanophore Lineage inInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Review
  4. CRISPR-based functional genomics tools in vertebrate models.Experimental & molecular medicine · 2025
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Base editing: advances and therapeutic opportunities.Nature reviews. Drug discovery · 2020
    Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Cas9 Ribonucleoprotein Complex Delivery: Methods and Applications for Neuroinflammation.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2019
    Review
  20. Dead Cas Systems: Types, Principles, and Applications.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Dong-Seok ParkDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
Mijung YoonDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
Jiyeon KweonDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
An-Hee JangDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
Yongsub KimDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
Sun-Cheol ChoiDepartment of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.
University of Ulsan · KRUlsan College · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome editing using programmable nucleases such as CRISPR/Cas9 or Cpf1 has emerged as powerful tools for gene knock-out or knock-in in various organisms. While most genetic diseases are caused by point mutations, these genome-editing approaches are inefficient in inducing single-nucleotide substitutions. Recently, Cas9-linked cytidine deaminases, named base editors (BEs), have been shown to convert cytidine to uridine efficiently, leading to targeted single-base pair substitutions in human cells and organisms. Here, we first report on the generation of Xenopus laevis mutants with targeted single-base pair substitutions using this RNA-guided programmable deaminase. Injection of base editor 3 (BE3) ribonucleoprotein targeting the tyrosinase (tyr) gene in early embryos can induce site-specific base conversions with the rates of up to 20.5%, resulting in oculocutaneous albinism phenotypes without off-target mutations. We further test this base-editing system by targeting the tp53 gene with the result that the expected single-base pair substitutions are observed at the target site. Collectively, these data establish that the programmable deaminases are efficient tools for creating targeted point mutations for human disease modeling in Xenopus.

Indexed as

Albinism, OculocutaneousAmino Acid SubstitutionAnimalsCytidine DeaminaseGene EditingMonophenol MonooxygenaseMutation RatePhenotypePoint MutationRNA, Guide, CRISPR-Cas SystemsXenopus laevisXenopus ProteinsCytidine DeaminaseMonophenol MonooxygenaseRNA, Guide, CRISPR-Cas SystemsXenopus Proteinsbase editingCRISPR/Cas9genome engineeringXenopus laevis

Identifiers

PMID29179261
PMCPMC5712511
OpenAlexW2924195738

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.