Evidence map›Paper›PMID 29178862›Full record

ArticleBMC cancer2017

Prevalence and types of high-risk human papillomaviruses in head and neck cancers from Bangladesh.

Mushfiq H Shaikh, Aminul I Khan, Anwar Sadat, Ahmed H Chowdhury, Shahed A Jinnah, Vinod Gopalan, Alfred K Lam, Daniel T W Clarke, Nigel A J McMillan, Newell W Johnson

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06642324 (Exploration of Human Papillomavirus Association and Genomic Characteristics in Head and Neck Squamous Cell Carcinomas in Bangladesh), which is not on this map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06642324 recruitingnot on this mapstarted 2024, after this paper: background citation

Exploration of Human Papillomavirus Association and Genomic Characteristics in Head and Neck Squamous Cell Carcinomas in Bangladesh

TypeobservationalSponsorBangabandhu Sheikh Mujib Medical University, Dhaka, BangladeshRan2024 to 2025Enrolled550ConditionsHead Neck Cancer, Oropharyngeal NeoplasmsArmsHistopathology, Immunohistochemistry, Real-Time PCR, Sequencing
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 34 citations in OpenAlex.

  1. Pooled it
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  5. p16Infectious agents and cancer · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Mushfiq H ShaikhSchool of Dentistry and Oral Health, Griffith University, Gold Coast, QLD, 4222, Australia.
Aminul I KhanDepartment of Pathology, National Medical College and Hospital, Dhaka, 1100, Bangladesh.
Anwar SadatDepartment of Oral and Maxillo-facial Surgery, Dhaka Dental College & Hospital, Dhaka, 1216, Bangladesh.
Ahmed H ChowdhuryDepartment of Neuro-medicine, Dhaka Medical College and Hospital, Dhaka, 1000, Bangladesh.
Shahed A JinnahDepartment of Pathology, Dhaka Medical College and Hospital, Dhaka, 1000, Bangladesh.
Vinod GopalanSchool of Medicine, Griffith University, Gold Coast, QLD, 4222, Australia.
Alfred K LamSchool of Medicine, Griffith University, Gold Coast, QLD, 4222, Australia.
Daniel T W ClarkeSchool of Medical Science, Griffith University, Gold Coast, QLD, 4222, Australia.
Nigel A J McMillanSchool of Medical Science, Griffith University, Gold Coast, QLD, 4222, Australia.
Newell W JohnsonSchool of Dentistry and Oral Health, Griffith University, Gold Coast, QLD, 4222, Australia. n.johnson@griffith.edu.au.
Dhaka Medical College and Hospital · BDGriffith University · AUMenzies School of Health Research · AU

Funding

Griffith Health Institute, Griffith University 1Griffith University 1
6 · The paper itself

Abstract

backgroundThere is a dramatic rise in the incidence of Human papillomavirus (HPV) - associated head and neck squamous cell carcinoma (HNSCC) in the world, with considerable variation by geography, gender and ethnicity. Little is known about the situation in Bangladesh, where tobacco- and areca nut-related head and neck cancers (HNCs) are the most common cancers in men. We aimed to determine the prevalence of HPV in HNSCC in Bangladesh and to explore the possible value of cell cycle markers in clinical diagnostic settings.

methodsOne hundred and ninety six archival HNSCC tissue samples were analysed for the presence of HPV DNA. The DNA quality was assured, and then amplified using a nested PCR approach. The typing of HPV was performed by automated DNA sequencing. Cellular markers p53, Cyclin D1 and pRb were tested on all samples by immunohistochemistry (IHC), as well as p16 as a putative surrogate for the detection of HPV.

resultsHPV DNA was detected in 36/174 (~21%) samples: 36% of cancers from the oropharynx; 31% of oral cancers, and 22% from the larynx. HPV-16 was most common, being present in 33 samples, followed by HPV-33 (2 samples) and HPV-31 (1 sample). Twenty-eight out of 174 samples were positive for p16, predominantly in HPV-positive tissues (p < 0.001). No statistically significant association was observed between the cellular markers and HPV DNA positive cases. However, p16 positivity had excellent predictive value for the presence of HPV by PCR.

conclusionThere is a significant burden of HPV-associated HNSCC in Bangladesh, particularly in the oropharynx but also in oral and laryngeal cancers. Whilst a combination of PCR-based DNA detection and p16 IHC is useful, the latter has excellent specificity, acceptable sensitivity and good predictive value for carriage of HPV in this population and should be used for prognostic evaluation and treatment planning of all HNSCC patients in South Asia, as in the Western world.

Indexed as

AdultAgedBangladeshBiomarkers, TumorDNA, ViralFemaleGenotypeHead and Neck NeoplasmsHumansImmunohistochemistryMaleMiddle AgedPapillomaviridaePapillomavirus InfectionsPolymerase Chain ReactionPopulation SurveillanceBiomarkers, TumorDNA, ViralBangladeshHead and neck squamous cell carcinoma (HNSCC)Human papillomavirus (HPV)Immunohistochemistry (IHC)Nested polymerase chain reaction (PCR)South Asia

Identifiers

PMID29178862
PMCPMC5702125
OpenAlexW2768769773

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.