Evidence map›Paper›PMID 29178559›Full record

ArticleMolecular reproduction and development2017

ARID1A, a component of SWI/SNF chromatin remodeling complexes, is required for porcine embryo development.

Yu-Chun Tseng, Birgit Cabot, Ryan A Cabot

Open access · greenAbstract read
In one paragraph

Article in Molecular reproduction and development, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Review
  6. Article
  7. Extracellular Vesicles and Viruses: Two Intertwined Entities.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yu-Chun TsengDepartment of Animal Sciences, Purdue University, West Lafayette, Indiana.
Birgit CabotDepartment of Animal Sciences, Purdue University, West Lafayette, Indiana.ORCID 0000-0003-3270-0194
Ryan A CabotDepartment of Animal Sciences, Purdue University, West Lafayette, Indiana.ORCID 0000-0002-4790-9655
Purdue University West Lafayette · US

Funding

Developmental Requirements of SWI/SNF Chromatin Remodeling Complexes in Porcine EmbryosR01HD084309 · NICHD · PURDUE UNIVERSITY · PI CABOT, RYAN A · 2015 to 2019
$1.6M
NICHD NIH HHS R01 HD084309
6 · The paper itself

Abstract

Mammalian embryos undergo dramatic epigenetic remodeling that can have a profound impact on both gene transcription and overall embryo developmental competence. Members of the SWI/SNF (Switch/Sucrose non-fermentable) family of chromatin-remodeling complexes reposition nucleosomes and alter transcription factor accessibility. These large, multi-protein complexes possess an SNF2-type ATPase (either SMARCA4 or SMARCA2) as their core catalytic subunit, and are directed to specific loci by associated subunits. Little is known about the identity of specific SWI/SNF complexes that serve regulatory roles during cleavage development. ARID1A, one of the SWI/SNF complex subunits, can affect histone methylation in somatic cells; here, we determined the developmental requirements of ARID1A in porcine oocytes and embryos. We found ARID1A transcript levels were significantly reduced in 4-cell porcine embryos as compared to germinal vesicle-stage oocytes, suggesting that ARID1A would be required for porcine cleavage-stage development. Indeed, injecting in vitro-matured and fertilized porcine oocytes with double-stranded interfering RNAs that target ARID1A, and evaluating their phenotype after seven days, revealed that the depletion of ARID1A results in significantly fewer cells than their respective control groups (p < 0.001).

Indexed as

AnimalsBlastocystChromatin Assembly and DisassemblyMultiprotein ComplexesNuclear ProteinsSwineMultiprotein ComplexesNuclear ProteinsBAFBRG1epigenetics

Identifiers

PMID29178559
PMCPMC5760285
OpenAlexW2768923632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.