Evidence map›Paper›PMID 29178053›Full record

ArticleJournal of clinical immunology2018

Autosomal Recessive Agammaglobulinemia Due to a Homozygous Mutation in PIK3R1.

Paoyun Tang, Julia E M Upton, Michelle A Barton-Forbes, Marina I Salvadori, Meghan P Clynick, April K Price, Sharan L Goobie

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Journal of clinical immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. PI3K Isoforms in B Cells.Current topics in microbiology and immunology · 2022
    Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. B Cell Disorders in Children-Part I.Current allergy and asthma reports · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Paoyun TangDepartment of Pediatrics, London Health Science Centre, 800 Commissioners Road East, London, ON, N6A 5W9, Canada.
Julia E M UptonDepartment of Pediatrics, Division of Immunology and Allergy, Hospital for Sick Children, University of Toronto, 7280-555 University Ave, Toronto, ON, M5G 1X8, Canada.
Michelle A Barton-ForbesDepartment of Pediatrics, London Health Science Centre, 800 Commissioners Road East, London, ON, N6A 5W9, Canada.
Marina I SalvadoriDepartment of Pediatrics, London Health Science Centre, 800 Commissioners Road East, London, ON, N6A 5W9, Canada.
Meghan P ClynickDepartment of Dermatology, Sunnybrook Health Science Centre, Unit M1 100, 2075 Bayview Avenue, Toronto, ON, M4N 3M5, Canada.
April K PriceDepartment of Pediatrics, London Health Science Centre, 800 Commissioners Road East, London, ON, N6A 5W9, Canada.
Sharan L GoobieMaritime Medical Genetics, Department of Pediatrics, Izaak Walton Killam (IWK) Health Centre, 5850/5980 University Avenue, PO Box 9700, Halifax, NS, B3K 6R8, Canada. Sharan.Goobie@iwk.nshealth.ca.
London Health Sciences Centre · CAHospital for Sick Children · CAIzaak Walton Killam Health Centre · CASunnybrook Health Science Centre · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of class IA phosphoinositide 3 kinases (PI3Ks) in immune function and regulation continues to expand with the identification of greater numbers of genetic variants. This case report is the second reported case of a homozygous premature stop codon within the PIK3R1 gene leading to autosomal recessive agammaglobulinemia. The proband, born to consanguineous parents, presented at 10 months of age with a history of oropharyngeal petechiae and bleeding from the mouth, gums, and tear ducts. Initial investigations revealed thrombocytopenia, neutropenia and the absence of B cells. Further genetic testing via a custom next-generation sequencing panel confirmed the presence of a homozygous mutation in PIK3R1, c.901 C>T, a premature stop codon at amino acid position 301. Given their many roles in immune regulation, recessive mutations in the PlK3R1 gene should be considered in infants presenting with hypogammaglobulinemia or agammaglobulinemia, particularly in the setting of parental consanguinity.

Indexed as

AgammaglobulinemiaClass Ia Phosphatidylinositol 3-KinaseConsanguinityFemaleHemorrhageHigh-Throughput Nucleotide SequencingHomozygoteHumansInfantMaleMutationPedigreePhosphatidylinositol 3-KinasesPurpuraClass Ia Phosphatidylinositol 3-KinasePhosphatidylinositol 3-KinasesPIK3R1 protein, humanAgammaglobulinemiaautosomal recessiveconsanguinityimmunodeficiencypediatricsPIK3R1

Identifiers

PMID29178053
OpenAlexW2770058383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.