Evidence map›Paper›PMID 29177973›Full record

ArticleJournal of molecular evolution2017

Phylogenetic Profiling of Mitochondrial Proteins and Integration Analysis of Bacterial Transcription Units Suggest Evolution of F1Fo ATP Synthase from Multiple Modules.

Yulong Niu, Shayan Moghimyfiroozabad, Sepehr Safaie, Yi Yang, Elizabeth A Jonas, Kambiz N Alavian

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 4 countries.

Yulong NiuDivision of Brain Sciences, Department of Medicine, Imperial College London, E508, Burlington Danes Hammersmith Hospital, DuCane Road, London, W12 0NN, UK.
Shayan MoghimyfiroozabadDepartment of Biology, The Bahá'í Institute for Higher Education (BIHE), Tehran, Iran.
Sepehr SafaieDepartment of Mathematics and Computer Science, The Bahá'í Institute for Higher Education (BIHE), Tehran, Iran.
Yi YangKey Lab of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, People's Republic of China.
Elizabeth A JonasDepartment of Internal Medicine, Endocrinology, Yale University, New Haven, CT, USA.
Kambiz N AlavianDivision of Brain Sciences, Department of Medicine, Imperial College London, E508, Burlington Danes Hammersmith Hospital, DuCane Road, London, W12 0NN, UK. k.alavian@imperial.ac.uk.
Sadra Institute Of Higher Education · IRYale University · USSichuan University · CN

Funding

Mitochondrial Ion Channels in Hypoxic NeuronsR37NS045876 · NINDS · YALE UNIVERSITY · PI Elizabeth Ann Jonas · 2014 to 2026
$4.9M
Mitochondrial ion channels in hypoxic neuronsR01NS045876 · NINDS · YALE UNIVERSITY · PI JONAS, ELIZABETH ANN · 2004 to 2013
$3.3M
Role of DJ1 in mitochondrial biogenergetics and neuronal metabolismR01NS081746 · NINDS · YALE UNIVERSITY · PI JONAS, ELIZABETH ANN · 2014 to 2018
$2.2M
Requirement for enhanced metabolic efficiency in hippocampal LTPR21NS104249 · NINDS · YALE UNIVERSITY · PI JONAS, ELIZABETH ANN · 2017 to 2018
$400k
NINDS NIH HHS R01 NS045876NINDS NIH HHS R01 NS081746NINDS NIH HHS R21 NS104249NINDS NIH HHS R37 NS045876
6 · The paper itself

Abstract

ATP synthase is a complex universal enzyme responsible for ATP synthesis across all kingdoms of life. The F-type ATP synthase has been suggested to have evolved from two functionally independent, catalytic (F1) and membrane bound (Fo), ancestral modules. While the modular evolution of the synthase is supported by studies indicating independent assembly of the two subunits, the presence of intermediate assembly products suggests a more complex evolutionary process. We analyzed the phylogenetic profiles of the human mitochondrial proteins and bacterial transcription units to gain additional insight into the evolution of the F-type ATP synthase complex. In this study, we report the presence of intermediary modules based on the phylogenetic profiles of the human mitochondrial proteins. The two main intermediary modules comprise the α

Indexed as

Adenosine TriphosphateEvolution, MolecularHumansMitochondriaMitochondrial ProteinsMitochondrial Proton-Translocating ATPasesPhylogenyProtein DomainsProtein Structural ElementsTranscription, GeneticAdenosine TriphosphateF1F0-ATP synthaseMitochondrial ProteinsMitochondrial Proton-Translocating ATPasesATPaseATP synthaseModular evolutionPhylogenetic profileTranscription units

Identifiers

PMID29177973
PMCPMC5709465
OpenAlexW2770540413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.