Evidence map›Paper›PMID 29177857›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2018

Biochemical Isolation of the Myddosome from Murine Macrophages.

Yunhao Tan, Jonathan C Kagan

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Yunhao TanDivision of Gastroenterology, Harvard Medical School, Boston Children's Hospital, Boston, MA, USA.
Jonathan C KaganDivision of Gastroenterology, Harvard Medical School, Boston Children's Hospital, Boston, MA, USA. jonathan.kagan@childrens.harvard.edu.
Boston Children's Hospital · USHarvard University · US

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
Initiation and Regulation of Antiviral Innate ImmunityR01AI093589 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI KAGAN, JONATHAN C · 2011 to 2020
$4.4M
Defining the pathways activated by Toll-like Receptors to stimulate immunityR37AI116550 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI JONATHAN C KAGAN · 2021 to 2026
$3.3M
Characterization of the myddosome, a protein complex that controls TLR signalingR01AI116550 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI KAGAN, JONATHAN C · 2017 to 2020
$1.8M
Initiation and Regulation of Antiviral Innate ImmunityR56AI093589 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI KAGAN, JONATHAN C · 2021 to 2021
$531k
NIAID NIH HHS R01 AI093589NIAID NIH HHS R01 AI116550NIAID NIH HHS R37 AI116550NIAID NIH HHS R56 AI093589NIDDK NIH HHS P30 DK034854
6 · The paper itself

Abstract

Ligand-induced macromolecular protein complex formation has emerged as a common means by which the innate immune system activates signal transduction pathways essential for host defense. Despite their structural divergence, key signaling molecules in diverse innate immune pathways mediate signal transduction by assembling higher-order protein complexes at specific subcellular locations in a stimulus-dependent manner. These protein complexes are collectively known as the supramolecular organizing centers (SMOCs), which link active receptors to a variety of downstream cellular responses. In the Toll-like receptor (TLR) pathway, the signaling adaptor MyD88 is the core of a SMOC called the myddosome, which is composed of the sorting adaptor TIRAP and the IRAK family kinases. Depending on the microbial ligands encountered, the myddosome can be assembled at the plasma membrane or endosomes, thereby leading to NF-ĸB and AP-1 activation, and the subsequent expression of pro-inflammatory cytokines. Herein, we provide a detailed protocol for studying myddosome assembly in murine bone marrow-derived macrophages (BMDMs).

Indexed as

AnimalsCells, CulturedImmunoprecipitationInterleukin-1 Receptor-Associated KinasesMacrophagesMembrane GlycoproteinsMiceMultiprotein ComplexesMyeloid Differentiation Factor 88Receptors, Interleukin-1Interleukin-1 Receptor-Associated KinasesIrak4 protein, mouseMembrane GlycoproteinsMultiprotein ComplexesMyd88 protein, mouseMyeloid Differentiation Factor 88Receptors, Interleukin-1TIRAP protein, mouseImmunoprecipitationMyD88MyddosomeSMOCsTLR

Identifiers

PMID29177857
PMCPMC6698367
OpenAlexW2769016327

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.