Evidence map›Paper›PMID 29176782›Full record

ArticlePloS one2017

A universal mammalian vaccine cell line substrate.

Jackelyn Murray, Kyle V Todd, Abhijeet Bakre, Nichole Orr-Burks, Les Jones, Weilin Wu, Ralph A Tripp

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  14. Atypical cyclins: the extended family portrait.Cellular and molecular life sciences : CMLS · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jackelyn MurrayDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.
Kyle V ToddDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.ORCID http://orcid.org/0000-0001-8475-9337
Abhijeet BakreDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.ORCID http://orcid.org/0000-0002-6755-5233
Nichole Orr-BurksDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.ORCID http://orcid.org/0000-0003-4713-2484
Les JonesDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.
Weilin WuDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.
Ralph A TrippDepartment of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA, United States of America.ORCID http://orcid.org/0000-0002-2924-9956

Funding

NIAID NIH HHS HHSN272201400004CNIAID NIH HHS HHSN272201500004C
6 · The paper itself

Abstract

Using genome-wide small interfering RNA (siRNA) screens for poliovirus, influenza A virus and rotavirus, we validated the top 6 gene hits PV, RV or IAV to search for host genes that when knocked-down (KD) enhanced virus permissiveness and replication over wild type Vero cells or HEp-2 cells. The enhanced virus replication was tested for 12 viruses and ranged from 2-fold to >1000-fold. There were variations in virus-specific replication (strain differences) across the cell lines examined. Some host genes (CNTD2, COQ9, GCGR, NDUFA9, NEU2, PYCR1, SEC16G, SVOPL, ZFYVE9, and ZNF205) showed that KD resulted in enhanced virus replication. These findings advance platform-enabling vaccine technology, the creation of diagnostic cells substrates, and are informative about the host mechanisms that affect virus replication in mammalian cells.

Indexed as

AnimalsCell LineChlorocebus aethiopsGene Knockdown TechniquesGenes, ViralGenomeMammalsReal-Time Polymerase Chain ReactionRNA, Small InterferingVaccinesVero CellsVirus ReplicationRNA, Small InterferingVaccines

Identifiers

PMID29176782
PMCPMC5703543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.