Evidence map›Paper›PMID 29176630›Full record

ArticleNature communications2017

Break-induced replication promotes formation of lethal joint molecules dissolved by Srs2.

Rajula Elango, Ziwei Sheng, Jessica Jackson, Jenna DeCata, Younis Ibrahim, Nhung T Pham, Diana H Liang, Cynthia J Sakofsky, Alessandro Vindigni, Kirill S Lobachev and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Mechanisms That Govern Recombinase Fidelity Control During Eukaryotic Homologous Recombination.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  3. Article
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  12. Review
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  16. Article
  17. Article
  18. Review
  19. Article
  20. Break-induced replication: unraveling each step.Trends in genetics : TIG · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Rajula ElangoDepartment of Biology, University of Iowa, Iowa City, IA, 52242, USA.
Ziwei ShengSchool of Biological Sciences and Institute for Bioengineering and Bioscience, Georgia Institute of Technology, Atlanta, GA, 30332, USA.
Jessica JacksonEdward A Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO, 63103, USA.
Jenna DeCataDepartment of Biology, University of Iowa, Iowa City, IA, 52242, USA.
Younis IbrahimDepartment of Biology, University of Iowa, Iowa City, IA, 52242, USA.
Nhung T PhamDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.
Diana H LiangDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.
Cynthia J SakofskyDepartment of Biology, University of Iowa, Iowa City, IA, 52242, USA.
Alessandro VindigniEdward A Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO, 63103, USA.
Kirill S LobachevSchool of Biological Sciences and Institute for Bioengineering and Bioscience, Georgia Institute of Technology, Atlanta, GA, 30332, USA. kirill.lobachev@biology.gatech.edu.
Grzegorz IraDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA. gira@bcm.edu.
Anna MalkovaDepartment of Biology, University of Iowa, Iowa City, IA, 52242, USA. anna-malkova@uiowa.edu.ORCID http://orcid.org/0000-0002-3880-1781
University of Iowa · USBaylor College of Medicine · USGeorgia Institute of Technology · USSaint Louis University · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
Regulation of DNA recombination in Saccharomyces cerevisiaeR01GM080600 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI IRA, GRZEGORZ A · 2007 to 2024
$5.5M
Amplification of risk resulting from mis-routing of double-strand break repairR01GM084242 · NIGMS · UNIVERSITY OF IOWA · PI MALKOVA, ANNA L · 2008 to 2017
$2.7M
New Mechanisms of Replication Stress ResponseR01GM108648 · NIGMS · SAINT LOUIS UNIVERSITY · PI VINDIGNI, ALESSANDRO · 2014 to 2018
$1.4M
NIGMS NIH HHS R01 GM080600NIGMS NIH HHS R01 GM084242NIGMS NIH HHS R01 GM108648
6 · The paper itself

Abstract

Break-induced replication (BIR) is a DNA double-strand break repair pathway that leads to genomic instabilities similar to those observed in cancer. BIR proceeds by a migrating bubble where asynchrony between leading and lagging strand synthesis leads to accumulation of long single-stranded DNA (ssDNA). It remains unknown how this ssDNA is prevented from unscheduled pairing with the template, which can lead to genomic instability. Here, we propose that uncontrolled Rad51 binding to this ssDNA promotes formation of toxic joint molecules that are counteracted by Srs2. First, Srs2 dislodges Rad51 from ssDNA preventing promiscuous strand invasions. Second, it dismantles toxic intermediates that have already formed. Rare survivors in the absence of Srs2 rely on structure-specific endonucleases, Mus81 and Yen1, that resolve toxic joint-molecules. Overall, we uncover a new feature of BIR and propose that tight control of ssDNA accumulated during this process is essential to prevent its channeling into toxic structures threatening cell viability.

Indexed as

Cell SurvivalDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA HelicasesDNA RepairDNA ReplicationDNA, Single-StrandedEndonucleasesHolliday Junction ResolvasesProtein BindingRad51 RecombinaseSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedEndonucleasesHolliday Junction ResolvasesMUS81 protein, S cerevisiaeRAD51 protein, S cerevisiaeRad51 RecombinaseSaccharomyces cerevisiae ProteinsSRS2 protein, S cerevisiaeYen1 protein, S cerevisiae

Identifiers

PMID29176630
PMCPMC5702615
OpenAlexW2770813668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.