Evidence map›Paper›PMID 29174542›Full record

ArticleCell chemical biology2018

Quantitative, Wide-Spectrum Kinase Profiling in Live Cells for Assessing the Effect of Cellular ATP on Target Engagement.

James D Vasta, Cesear R Corona, Jennifer Wilkinson, Chad A Zimprich, James R Hartnett, Morgan R Ingold, Kristopher Zimmerman, Thomas Machleidt, Thomas A Kirkland, Kristin G Huwiler and 18 more

Open access · hybridAbstract read
In one paragraph

Article in Cell chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 148 papers.

0numbers the graph read from it
0cells of the map it votes in
148citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

148 citing papers in PubMed, 281 citations in OpenAlex.

  1. Article
  2. Article
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  4. Identification of potent inhibitors of JUN N-terminal kinases for treatment of endometriosis and associated pain.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  9. Review
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  12. Review
  13. Article
  14. Article
  15. Article
  16. Cellular Context Influences Kinase Inhibitor Selectivity.Journal of medicinal chemistry · 2026
    Article
  17. A Scalable Design for Proximity-Inducing Molecules.bioRxiv : the preprint server for biology · 2026
    Article
  18. Article
  19. Article
  20. Article

88 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 6 institutions in 4 countries.

James D VastaPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Cesear R CoronaPromega Biosciences Incorporated, 277 Granada Drive, San Luis Obispo, CA 93401, USA.
Jennifer WilkinsonPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Chad A ZimprichPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
James R HartnettPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Morgan R IngoldPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Kristopher ZimmermanPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Thomas MachleidtPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Thomas A KirklandPromega Biosciences Incorporated, 277 Granada Drive, San Luis Obispo, CA 93401, USA.
Kristin G HuwilerPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Rachel Friedman OhanaPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Michael SlaterPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Paul OttoPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Mei CongPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Carrow I WellsStructural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Benedict-Tilman BergerStructural Genomics Consortium, Institute for Pharmaceutical Chemistry, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 9, 60438 Frankfurt am Main, Germany; Structural Genomics Consortium, Buchmann Institute for Molecular Life Sciences, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 15, 60438 Frankfurt am Main, Germany.
Thomas HankeStructural Genomics Consortium, Institute for Pharmaceutical Chemistry, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 9, 60438 Frankfurt am Main, Germany.
Carina GlasStructural Genomics Consortium, Nuffield Department of Medicine, University of Oxford, Oxford, UK; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Ke DingState Key Laboratory of Respiratory Diseases, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, 190 Kaiyuan Avenue, Guangzhou 510530, China; School of Pharmacy, Jinan University, 601 Huangpu Avenue West, Guangzhou 510632, China.
David H DrewryStructural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Kilian V M HuberStructural Genomics Consortium, Nuffield Department of Medicine, University of Oxford, Oxford, UK; Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Timothy M WillsonStructural Genomics Consortium, UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Stefan KnappStructural Genomics Consortium, Institute for Pharmaceutical Chemistry, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 9, 60438 Frankfurt am Main, Germany; Structural Genomics Consortium, Buchmann Institute for Molecular Life Sciences, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 15, 60438 Frankfurt am Main, Germany.
Susanne MüllerStructural Genomics Consortium, Buchmann Institute for Molecular Life Sciences, Johann Wolfgang Goethe-University, Max-von-Laue-Straße 15, 60438 Frankfurt am Main, Germany.
Poncho L MeisenheimerPromega Biosciences Incorporated, 277 Granada Drive, San Luis Obispo, CA 93401, USA.
Frank FanPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Keith V WoodPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA.
Matthew B RobersPromega Corporation, 2800 Woods Hollow Road, Fitchburg, WI 53711, USA. Electronic address: matt.robers@promega.com.
Promega (United States) · USGoethe University Frankfurt · DEUniversity of North Carolina at Chapel Hill · USChinese Academy of Sciences · CNGenomics (United Kingdom) · GBUniversity of Oxford · GB

Funding

Illuminating Function of the Understudied Druggable KinomeU24DK116204 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JOHNSON, GARY L. · 2017 to 2022
$13.6M
NIDDK NIH HHS U24 DK116204Wellcome Trust 106169/ZZ14/Z
6 · The paper itself

Abstract

For kinase inhibitors, intracellular target selectivity is fundamental to pharmacological mechanism. Although a number of acellular techniques have been developed to measure kinase binding or enzymatic inhibition, such approaches can fail to accurately predict engagement in cells. Here we report the application of an energy transfer technique that enabled the first broad-spectrum, equilibrium-based approach to quantitatively profile target occupancy and compound affinity in live cells. Using this method, we performed a selectivity profiling for clinically relevant kinase inhibitors against 178 full-length kinases, and a mechanistic interrogation of the potency offsets observed between cellular and biochemical analysis. For the multikinase inhibitor crizotinib, our approach accurately predicted cellular potency and revealed improved target selectivity compared with biochemical measurements. Due to cellular ATP, a number of putative crizotinib targets are unexpectedly disengaged in live cells at a clinically relevant drug dose.

Indexed as

Adenosine TriphosphateCell SurvivalDose-Response Relationship, DrugEnergy TransferEnzyme-Linked Immunosorbent AssayHEK293 CellsHumansMass SpectrometryMolecular StructurePhosphotransferasesProtein Kinase InhibitorsStructure-Activity RelationshipAdenosine TriphosphatePhosphotransferasesProtein Kinase InhibitorsATPBRETcrizotinibdasatinibkinaseNanoBRETNanoLucprofilingselectivitytarget engagement

Identifiers

PMID29174542
PMCPMC5814754
OpenAlexW2769161116

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.