Evidence map›Paper›PMID 29173239›Full record

ArticleEpidemiology and infection2018

First phylogenetic analysis of dengue virus serotype 4 circulating in Espírito Santo state, Brazil, in 2013 and 2014.

C R Vicente, C S Pannuti, P R Urbano, A C Felix, C Cerutti Junior, K-H Herbinger, G Fröschl, C M Romano

Abstract read
In one paragraph

Article in Epidemiology and infection, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

C R VicenteCentre for International Health, Medical Centre of the University of Munich,Munich,Germany.
C S PannutiInstitute of Tropical Medicine, University of São Paulo,São Paulo,Brazil.
P R UrbanoInstitute of Tropical Medicine, University of São Paulo,São Paulo,Brazil.
A C FelixInstitute of Tropical Medicine, University of São Paulo,São Paulo,Brazil.
C Cerutti JuniorDepartment of Social Medicine,Federal University of Espírito Santo,Vitória,Brazil.
K-H HerbingerDivision of Infectious Diseases and Tropical Medicine,Medical Centre of the University of Munich,Munich,Germany.
G FröschlCentre for International Health, Medical Centre of the University of Munich,Munich,Germany.
C M RomanoInstitute of Tropical Medicine, University of São Paulo,São Paulo,Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of the present study was to reconstruct the phylogeny of dengue virus serotype 4 (DENV-4) that was circulating in Espírito Santo state, Brazil, in 2013 and 2014, and to discuss the epidemiological implications associated with this evolutionary hypothesis. Partial envelope gene of eight DENV-4 samples from Espírito Santo state were sequenced and aligned with 72 worldwide DENV-4 reference sequences from GenBank. A phylogenetic tree was reconstructed through Bayesian Inference and the Time of the Most Recent Common Ancestor was estimated. The study detected the circulation of DENV-4 genotype II in Espírito Santo state, which was closely related to strains from the states of Mato Grosso collected in 2012 and of São Paulo sampled in 2015. This cluster emerged around 2011, approximately 4 years after the entry of the genotype II in Brazil through its northern states, possibly imported from Venezuela and Colombia. This is so far the first phylogenetic study of the DENV-4 circulating in Espírito Santo state and shows the importance of an internal route of dengue viral circulation in Brazil to the introduction of the virus into this state.

Indexed as

PhylogenyBrazilDengue VirusHumansSequence Analysis, RNASerogroupBrazildengue virusepidemicgenotypephylogeny

Identifiers

PMID29173239
PMCPMC9134568

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.