Evidence map›Paper›PMID 29172488›Full record

ArticleJournal of chemical information and modeling2017

Identification of Allosteric Modulators of Metabotropic Glutamate 7 Receptor Using Proteochemometric Modeling.

Gary Tresadern, Andres A Trabanco, Laura Pérez-Benito, John P Overington, Herman W T van Vlijmen, Gerard J P van Westen

Open access · hybridAbstract read
In one paragraph

Article in Journal of chemical information and modeling, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Current computational methods for predicting protein interactions of natural products.Computational and structural biotechnology journal · 2019
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Andres A TrabancoORCID 0000-0002-4225-758X
Laura Pérez-Benito
John P OveringtonChEMBL Group, EMBL-EBI, Wellcome Trust Genome Campus, CB10 1SD Hinxton, United Kingdom.
Herman W T van VlijmenComputational Chemistry, Janssen Research & Development , Turnhoutseweg 30, B-2340 Beerse, Belgium.
Gerard J P van WestenChEMBL Group, EMBL-EBI, Wellcome Trust Genome Campus, CB10 1SD Hinxton, United Kingdom.ORCID 0000-0003-0717-1817
European Bioinformatics Institute · GBJanssen (Belgium) · BE

Funding

Wellcome Trust WT086151/Z/08/ZWellcome Trust WT104104/Z/14/Z
6 · The paper itself

Abstract

Proteochemometric modeling (PCM) is a computational approach that can be considered an extension of quantitative structure-activity relationship (QSAR) modeling, where a single model incorporates information for a family of targets and all the associated ligands instead of modeling activity versus one target. This is especially useful for situations where bioactivity data exists for similar proteins but is scarce for the protein of interest. Here we demonstrate the application of PCM to identify allosteric modulators of metabotropic glutamate (mGlu) receptors. Given our long-running interest in modulating mGlu receptor function we compiled a matrix of compound-target bioactivity data. Some members of the mGlu family are well explored both internally and in the public domain, while there are much fewer examples of ligands for other targets such as the mGlu

Indexed as

Quantitative Structure-Activity RelationshipAllosteric RegulationAmino Acid SequenceAnimalsComputer SimulationDrug DiscoveryHumansLigandsMiceModels, BiologicalMolecular Docking SimulationRatsReceptors, Metabotropic GlutamateLigandsmetabotropic glutamate receptor 7Receptors, Metabotropic Glutamate

Identifiers

PMID29172488
PMCPMC5755953
OpenAlexW2769068104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.