Evidence map›Paper›PMID 29170974›Full record

ArticleInternational ophthalmology2018

Comparative proteomic analysis of amnion membrane transplantation and cross-linking treatments in an experimental alkali injury model.

Sevgi Subasi, Ozgul Altintas, Murat Kasap, Nil Guzel, Gurler Akpinar, Suleyman Karaman

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Article in International ophthalmology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 77% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sevgi SubasiDepartment of Ophthalmology, Körfez State Hospital, Kocaeli, Turkey. sevgiozel_5@hotmail.com.
Ozgul AltintasDepartment of Ophthalmology, Medical Faculty, Acıbadem University, Istanbul, Turkey.
Murat KasapDepartment of Medical Biology, Medical Faculty, Kocaeli University, Kocaeli, Turkey.
Nil GuzelDepartment of Medical Biology, Medical Faculty, Kocaeli University, Kocaeli, Turkey.
Gurler AkpinarDepartment of Medical Biology, Medical Faculty, Kocaeli University, Kocaeli, Turkey.
Suleyman KaramanDepartment of Ophthalmology, Talya Medical Center, Antalya, Turkey.
Kocaeli Üniversitesi · TRAcıbadem University · TRAntalya IVF · TRSivas State Hospital · TR

Funding

Kocaeli University Scientific Research Project Coordination Unit 2015/016
6 · The paper itself

Abstract

purposeIn this study, by using a two-dimensional (2D) electrophoresis-based experimental approach, we aimed at understanding the nature of alkali injuries and the underlying mechanisms. A secondary aim was to compare the effects of cross-linking (CXL) and amnion membrane transplantation (AMT) on corneal protein compositions at the end of the early repair phase after injured with alkali.

methodThe right corneas of 24 rabbits were injured with a 1 N solution of NaOH. Groups were formed based on the adjuvant therapies as (1) healthy group, (2) control group, (3) CXL group, (4) AMT group. In addition to the therapies, a conventional medical treatment was applied to all groups. Left eyes were used as within-subject healthy corneas (1). The corneas were excised at day 21, and a comparative proteomic analysis was performed using 2D gel electrophoresis coupled with MALDI-TOF/TOF.

result2D gel electrophoresis revealed the presence seven protein spots whose abundance changed among the groups. Those proteins were SH3 domain-binding protein, plant homeodomain finger protein 23, S100 calcium binding protein A-11(S100 A11), keratin type 2 cytoskeletal 1 and 2, transketolase and glyceraldehyde 3-phosphate dehydrogenase. Ingenuity pathway analysis predicted that the observed changes may be linked to a central metabolic pathway, transforming growth factor beta 1. Canonical pathway analysis focused our attention to two different pathways, namely nicotinamide adenine dinucleotide repair pathway and non-oxidative branch of pentose phosphate pathway.

conclusionOur results shed some light onto the molecular mechanisms affected by alkali injury and adjuvant treatments. Further research is needed to propose medically significant target molecules that may be used for novel drug developments for alkali injury.

Indexed as

AlkaliesAmnionAnimalsBiomarkersBurns, ChemicalCorneal InjuriesCross-Linking ReagentsDisease Models, AnimalElectrophoresisEye BurnsEye ProteinsFemaleHumansProteomicsRabbitsAlkaliesBiomarkersCross-Linking ReagentsEye ProteinsAlkali injuryAmnion membrane transplantationCross-linkingProteomic analysisTwo-dimensional electrophoresis

Identifiers

PMID29170974
OpenAlexW2768586057

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.