Evidence map›Paper›PMID 29170508›Full record

ArticleScientific reports2017

Differential distribution of Y-chromosome haplotypes in Swiss and Southern European goat breeds.

Oriol Vidal, Cord Drögemüller, Gabriela Obexer-Ruff, Irene Reber, Jordi Jordana, Amparo Martínez, Valentin Adrian Bâlteanu, Juan Vicente Delgado, Shahin Eghbalsaied, Vincenzo Landi and 12 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 13 institutions in 9 countries.

Oriol VidalDepartament de Biologia, Universitat de Girona, 17003, Girona, Spain. oriol.vidal@udg.cat.
Cord DrögemüllerInstitute of Genetics, University of Bern, Bern, 3001, Switzerland.ORCID 0000-0001-9773-522X
Gabriela Obexer-RuffInstitute of Genetics, University of Bern, Bern, 3001, Switzerland.
Irene ReberInstitute of Genetics, University of Bern, Bern, 3001, Switzerland.
Jordi JordanaDepartament de Ciència Animal i dels Aliments, Facultat de Veterinària, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain.
Amparo MartínezDepartamento de Genética, Universidad de Córdoba, 14071, Córdoba, Spain.
Valentin Adrian BâlteanuInstitute of Life Sciences, Faculty of Animal Science and Biotechnologies, University of Agricultural Sciences and Veterinary Medicine, 400372, Cluj-Napoca, Romania.
Juan Vicente DelgadoDepartamento de Genética, Universidad de Córdoba, 14071, Córdoba, Spain.
Shahin EghbalsaiedTransgenesis Center of Excellence, Isfahan (Khorasgan) Branch, Islamic Azad University, Isfahan, Iran.
Vincenzo LandiDepartamento de Genética, Universidad de Córdoba, 14071, Córdoba, Spain.
Felix GoyacheÁrea de Genética y Reproducción Animal, SERIDA-Deva, Camino de Rioseco 1225, Gijón, 33394, Spain.
Amadou TraoréInstitut de l'Environnement et Recherches Agricoles, 04 BP 8645, Ouagadougou, 04, Burkina Faso.
Michele PazzolaDepartment of Veterinary Medicine, University of Sassari, 07100, Sassari, Italy.
Giuseppe Massimo VaccaDepartment of Veterinary Medicine, University of Sassari, 07100, Sassari, Italy.
Bouabid BadaouiUniversity Mohammed V, Agdal, Faculty of Sciences, 4 Av. Ibn Battota, Rabat, Morocco.
Fabio PillaDipartimento Agricoltura, Ambiente e Alimenti, Università Degli Studi Del Molise, Campobasso, Italy.
Mariasilvia D'AndreaDipartimento Agricoltura, Ambiente e Alimenti, Università Degli Studi Del Molise, Campobasso, Italy.
Isabel ÁlvarezÁrea de Genética y Reproducción Animal, SERIDA-Deva, Camino de Rioseco 1225, Gijón, 33394, Spain.
Juan CapoteInstituto Canario de Investigaciones Agrarias, Canary Islands, Tenerife, La Laguna 38108, Spain.
Abdoallah SharafGenetic Department, Faculty of Agriculture, Ain Shams University, Cairo, 11241, Egypt.
Àgueda PonsUnitat de Races Autòctones, Servei de Millora Agrària, (SEMILLA-SAU), Son Ferriol, 07198, Spain.
Marcel AmillsDepartament de Ciència Animal i dels Aliments, Facultat de Veterinària, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain.
University of Bern · CHUniversity of Córdoba · ESServicio Regional de Investigación y Desarrollo Agroalimentario · ESUniversitat Autònoma de Barcelona · ESUniversity of Molise · ITUniversity of Sassari · ITAin Shams University · EGInstitut de l'Environnement et Recherches Agricoles · BFInstituto Canario de Investigaciones Agrarias · ESIslamic Azad University, Isfahan · IRMohammed V University · MAUniversitat de Girona · ESUniversity of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca · RO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The analysis of Y-chromosome variation has provided valuable clues about the paternal history of domestic animal populations. The main goal of the current work was to characterize Y-chromosome diversity in 31 goat populations from Central Eastern (Switzerland and Romania) and Southern Europe (Spain and Italy) as well as in reference populations from Africa and the Near East. Towards this end, we have genotyped seven single nucleotide polymorphisms (SNPs), mapping to the SRY, ZFY, AMELY and DDX3Y Y-linked loci, in 275 bucks from 31 populations. We have observed a low level of variability in the goat Y-chromosome, with just five haplotypes segregating in the whole set of populations. We have also found that Swiss bucks carry exclusively Y1 haplotypes (Y1A: 24%, Y1B1: 15%, Y1B2: 43% and Y1C: 18%), while in Italian and Spanish bucks Y2A is the most abundant haplotype (77%). Interestingly, in Carpathian goats from Romania the Y2A haplotype is also frequent (42%). The high Y-chromosome differentiation between Swiss and Italian/Spanish breeds might be due to the post-domestication spread of two different Near Eastern genetic stocks through the Danubian and Mediterranean corridors. Historical gene flow between Southern European and Northern African goats might have also contributed to generate such pattern of genetic differentiation.

Indexed as

AnimalsGenetics, PopulationGenotypeGoatsHaplotypesMicrosatellite RepeatsY Chromosome

Identifiers

PMID29170508
PMCPMC5701018
OpenAlexW2770582549

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.