Evidence map›Paper›PMID 29170386›Full record

ArticleNature communications2017

Glucocorticoid-induced phosphorylation by CDK9 modulates the coactivator functions of transcriptional cofactor GRIP1 in macrophages.

David A Rollins, Joubert B Kharlyngdoh, Maddalena Coppo, Bowranigan Tharmalingam, Sanda Mimouna, Ziyi Guo, Maria A Sacta, Miles A Pufall, Robert P Fisher, Xiaoyu Hu and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 35 citations in OpenAlex.

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  13. Machine learning reveals STAT motifs as predictors for GR-mediated gene repression.Computational and structural biotechnology journal · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

David A RollinsGraduate Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School of Medical Sciences, 1300 York Avenue, New York, NY, 10021, USA.
Joubert B KharlyngdohHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.ORCID http://orcid.org/0000-0001-5908-5115
Maddalena CoppoHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Bowranigan TharmalingamHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Sanda MimounaHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Ziyi GuoInstitute for Immunology and School of Medicine, Tsinghua University, Beijing, 100084, China.
Maria A SactaHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Miles A PufallDepartment of Biochemistry, University of Iowa, 51 Newton Road, Iowa City, IA, 52242, USA.
Robert P FisherDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY, 10029, USA.ORCID http://orcid.org/0000-0001-9873-8457
Xiaoyu HuHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Yurii ChinenovHospital for Special Surgery Research Institute, The David Rosensweig Genomics Center, 535 East 70th Street, New York, NY, 10021, USA.
Inez RogatskyGraduate Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School of Medical Sciences, 1300 York Avenue, New York, NY, 10021, USA. rogatskyi@hss.edu.
Hospital for Special Surgery · USIcahn School of Medicine at Mount Sinai · USTsinghua University · CNUniversity of Iowa · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Glucocorticoid-regulated transcription networks in macrophage biologyR01DK099087 · NIDDK · HOSPITAL FOR SPECIAL SURGERY · PI INEZ ROGATSKY · 2014 to 2026
$6.0M
ORTHOPAEDIC RESEARCH TRAININGT32AR007281 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI MAHER, SUZANNE A., VAN DER MEULEN, MARJOLEIN C · 1986 to 2018
$1.8M
Chemical Genetics of Transcriptional Regulation by CDKs in Human CellsR01GM104291 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI FISHER, ROBERT P · 2014 to 2017
$1.3M
The Glucocorticoid Receptor as Signal Integrator: Studying All Drug ResistanceR00CA149088 · NCI · UNIVERSITY OF IOWA · PI PUFALL, MILES A · 2011 to 2013
$699k
The glucocorticoid receptor as signal integrator: studying ALL drug resistanceK99CA149088 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PUFALL, MILES A · 2010 to 2011
$233k
NCI NIH HHS K99 CA149088NCI NIH HHS R00 CA149088NIAMS NIH HHS T32 AR007281NIDDK NIH HHS R01 DK099087NIGMS NIH HHS R01 GM104291NIGMS NIH HHS T32 GM007739
6 · The paper itself

Abstract

The glucocorticoid (GC) receptor (GR) suppresses inflammation by activating anti-inflammatory and repressing pro-inflammatory genes. GR-interacting protein-1 (GRIP1) is a GR corepressor in macrophages, however, whether GRIP1 mediates GR-activated transcription, and what dictates its coactivator versus corepressor properties is unknown. Here we report that GRIP1 loss in macrophages attenuates glucocorticoid induction of several anti-inflammatory targets, and that GC treatment of quiescent macrophages globally directs GRIP1 toward GR binding sites dominated by palindromic GC response elements (GRE), suggesting a non-redundant GRIP1 function as a GR coactivator. Interestingly, GRIP1 is phosphorylated at an N-terminal serine cluster by cyclin-dependent kinase-9 (CDK9), which is recruited into GC-induced GR:GRIP1:CDK9 hetero-complexes, producing distinct GRE-specific GRIP1 phospho-isoforms. Phosphorylation potentiates GRIP1 coactivator but, remarkably, not its corepressor properties. Consistently, phospho-GRIP1 and CDK9 are not detected at GR transrepression sites near pro-inflammatory genes. Thus, GR restricts actions of its own coregulator via CDK9-mediated phosphorylation to a subset of anti-inflammatory genes.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBinding SitesCarrier ProteinsCell LineCells, CulturedCyclin-Dependent Kinase 9DexamethasoneGene Knockdown TechniquesGlucocorticoidsHumansInflammationMacrophagesMaleMiceMice, Inbred C57BLAdaptor Proteins, Signal TransducingCarrier ProteinsCDK9 protein, humanCdk9 protein, mouseCyclin-Dependent Kinase 9DexamethasoneGlucocorticoidsGRIP1 protein, humanGrip1 protein, mouseNerve Tissue ProteinsReceptors, Glucocorticoid

Identifiers

PMID29170386
PMCPMC5700924
OpenAlexW2770885576

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.