Evidence map›Paper›PMID 29168174›Full record

SynthesisInternational journal of cancer2018

Genetic variants in the platelet-derived growth factor subunit B gene associated with pancreatic cancer risk.

Bensong Duan, Jiangfeng Hu, Hongliang Liu, Yanru Wang, Hongyu Li, Shun Liu, Jichun Xie, Kouros Owzar, James Abbruzzese, Herbert Hurwitz and 2 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in International journal of cancer, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Pancreatic Cancer and Platelets Crosstalk: A Potential Biomarker and Target.Frontiers in cell and developmental biology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Associations of novel variants inAmerican journal of cancer research · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Bensong DuanDepartment of Gastroenterology, Institute of Digestive Diseases, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.
Jiangfeng HuDepartment of Gastroenterology, Institute of Digestive Diseases, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.
Hongliang LiuDuke Cancer Institute, Duke University Medical Center, Durham, NC.ORCID 0000-0001-7639-0904
Yanru WangDuke Cancer Institute, Duke University Medical Center, Durham, NC.
Hongyu LiDuke Cancer Institute, Duke University Medical Center, Durham, NC.
Shun LiuDuke Cancer Institute, Duke University Medical Center, Durham, NC.
Jichun XieDepartment of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, NC.
Kouros OwzarDuke Cancer Institute, Duke University Medical Center, Durham, NC.
James AbbruzzeseDuke Cancer Institute, Duke University Medical Center, Durham, NC.
Herbert HurwitzDuke Cancer Institute, Duke University Medical Center, Durham, NC.
Hengjun GaoDepartment of Gastroenterology, Institute of Digestive Diseases, Tongji Hospital, Tongji University School of Medicine, Shanghai, China.
Qingyi WeiDuke Cancer Institute, Duke University Medical Center, Durham, NC.ORCID 0000-0002-3845-9445
Duke University · USTongji University · CNGuangxi Medical University · CN

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI Laura Fish · 1985 to 2026
$174.8M
Validation and Fine-Scale Mapping of Pancreatic Cancer Susceptibility Loci (Study)R01CA154823 · NCI · JOHNS HOPKINS UNIVERSITY · PI KLEIN, ALISON P · 2011 to 2020
$5.7M
Cohort Study of Biochemical and Genetic Risk Factors for Pancreatic CancerK07CA140790 · NCI · DANA-FARBER CANCER INST · PI WOLPIN, BRIAN MATTHEW · 2009 to 2013
$890k
Data commons for 'omic, microscopy and analysis core facilitiesS10OD018164 · OD · DUKE UNIVERSITY · PI WRAY, GREGORY A. · 2014 to 2014
$598k
CCR NIH HHS HHSN261200800001CHoward Hughes Medical InstituteNCI NIH HHS HHSN261200800001ENCI NIH HHS K07 CA140790NCI NIH HHS P30 CA014236NCI NIH HHS R01 CA154823NHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INIH HHS S10 OD018164
6 · The paper itself

Abstract

The platelet-derived growth factor (PDGF) signaling pathway plays important roles in development and progression of human cancers. In our study, we aimed to identify genetic variants of the PDGF pathway genes associated with pancreatic cancer (PC) risk in European populations using three published genome-wide association study datasets, which consisted of 9,381 cases and 7,719 controls. The expression quantitative trait loci (eQTL) analysis was also performed using data from the 1000 Genomes, TCGA and GTEx projects. As a result, we identified two potential susceptibility loci (rs5757573 and rs6001516) of PDGFB associated with PC risk [odds ratio (OR) = 1.10, 95% confidence interval (CI) = 1.05-1.16, and p = 4.70 × 10

Indexed as

AgedCase-Control StudiesCrk-Associated Substrate ProteinFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyGenotypeHumansMaleMiddle AgedPancreatic NeoplasmsPolymorphism, Single NucleotideProto-Oncogene Proteins c-sisQuantitative Trait LociBCAR1 protein, humanCrk-Associated Substrate ProteinProto-Oncogene Proteins c-sisgenome-wide association studypancreatic cancer susceptibilitypathway analysisplatelet-derived growth factorsingle nucleotide polymorphism

Identifiers

PMID29168174
PMCPMC5805574
OpenAlexW2768371518

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.