Evidence map›Paper›PMID 29167458›Full record

ArticleNature communications2017

Assembly of CRISPR ribonucleoproteins with biotinylated oligonucleotides via an RNA aptamer for precise gene editing.

Jared Carlson-Stevermer, Amr A Abdeen, Lucille Kohlenberg, Madelyn Goedland, Kaivalya Molugu, Meng Lou, Krishanu Saha

Abstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed.

  1. Article
  2. Article
  3. Transposase-Assisted Donor Tethering Boosts Large-Fragment HDR in Plants.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. A comprehensive review onFrontiers in genetics · 2024
    Review
  18. Article
  19. Review
  20. Strategies for precise gene edits in mammalian cells.Molecular therapy. Nucleic acids · 2023
    Review

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jared Carlson-StevermerWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Amr A AbdeenWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Lucille KohlenbergWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Madelyn GoedlandWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Kaivalya MoluguWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Meng LouWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA.
Krishanu SahaWisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, USA. ksaha@wisc.edu.ORCID http://orcid.org/0000-0003-2837-0858

Funding

Assembly of Novel Gene Editing Particles to Understand Genome Surgery in Patient-Derived CellsR35GM119644 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI SAHA, KRISHANU · 2016 to 2025
$4.0M
NIGMS NIH HHS R35 GM119644
6 · The paper itself

Abstract

Writing specific DNA sequences into the human genome is challenging with non-viral gene-editing reagents, since most of the edited sequences contain various imprecise insertions or deletions. We developed a modular RNA aptamer-streptavidin strategy, termed S1mplex, to complex CRISPR-Cas9 ribonucleoproteins with a nucleic acid donor template, as well as other biotinylated molecules such as quantum dots. In human cells, tailored S1mplexes increase the ratio of precisely edited to imprecisely edited alleles up to 18-fold higher than standard gene-editing methods, and enrich cell populations containing multiplexed precise edits up to 42-fold. These advances with versatile, preassembled reagents could greatly reduce the time and cost of in vitro or ex vivo gene-editing applications in precision medicine and drug discovery and aid in the development of increased and serial dosing regimens for somatic gene editing in vivo.

Indexed as

CRISPR-Cas SystemsAptamers, NucleotideBase SequenceBiotinylationCells, CulturedGene EditingHEK293 CellsHigh-Throughput Nucleotide SequencingHumansOligonucleotidesPluripotent Stem CellsPrecision MedicineRibonucleoproteinsStreptavidinAptamers, NucleotideOligonucleotidesRibonucleoproteinsStreptavidin

Identifiers

PMID29167458
PMCPMC5700129

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.