Evidence map›Paper›PMID 29166596›Full record

ArticleCell reports2017

The GCN2-ATF4 Signaling Pathway Induces 4E-BP to Bias Translation and Boost Antimicrobial Peptide Synthesis in Response to Bacterial Infection.

Deepika Vasudevan, Nicholas K Clark, Jessica Sam, Victoria C Cotham, Beatrix Ueberheide, Michael T Marr, Hyung Don Ryoo

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Insulin receptor orchestrates kidney antibacterial defenses.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Regulating metabolism to shape immune function: Lessons from Drosophila.Seminars in cell & developmental biology · 2023
    Review
  12. Multiple Roles of the Stress Sensor GCN2 in Immune Cells.International journal of molecular sciences · 2023
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Drosophila Unfolded Protein Response (UPR) Assays In Vitro and In Vivo.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Deepika VasudevanDepartment of Cell Biology, New York University School of Medicine, New York, NY 10016, USA.
Nicholas K ClarkDepartment of Biology, Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, MA 02453, USA.
Jessica SamDepartment of Cell Biology, New York University School of Medicine, New York, NY 10016, USA.
Victoria C CothamProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016, USA.
Beatrix UeberheideProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016, USA.
Michael T MarrDepartment of Biology, Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, MA 02453, USA.
Hyung Don RyooDepartment of Cell Biology, New York University School of Medicine, New York, NY 10016, USA. Electronic address: hyungdon.ryoo@nyumc.org.
New York University · USBrandeis University · US

Funding

GENETIC AND BIOCHEMICAL MECHANISMS OF REGULATIONT32GM007122 · NIGMS · BRANDEIS UNIVERSITY · PI LOVETT, SUSAN THOMAS · 1985 to 2020
$7.5M
Unfolded Protein Response in Eye Development and DiseaseR01EY020866 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2010 to 2026
$6.9M
FOXO Regulon and Translation ControlR01GM117034 · NIGMS · BRANDEIS UNIVERSITY · PI MARR, MICHAEL THOMAS · 2016 to 2019
$1.3M
Protein Sequencing Tools for Biological TherapeuticsR41GM103362 · NIGMS · PROTEIN METRICS, LLC · PI FENYO, DAVID · 2012 to 2014
$686k
NEI NIH HHS R01 EY020866NIGMS NIH HHS R01 GM117034NIGMS NIH HHS R41 GM103362NIGMS NIH HHS T32 GM007122
6 · The paper itself

Abstract

Bacterial infection often leads to suppression of mRNA translation, but hosts are nonetheless able to express immune response genes through as yet unknown mechanisms. Here, we use a Drosophila model to demonstrate that antimicrobial peptide (AMP) production during infection is paradoxically stimulated by the inhibitor of cap-dependent translation, 4E-BP (eIF4E-binding protein; encoded by the Thor gene). We found that 4E-BP is induced upon infection with pathogenic bacteria by the stress-response transcription factor ATF4 and its upstream kinase, GCN2. Loss of gcn2, atf4, or 4e-bp compromised immunity. While AMP transcription is unaffected in 4e-bp mutants, AMP protein levels are substantially reduced. The 5' UTRs of AMPs score positive in cap-independent translation assays, and this cap-independent activity is enhanced by 4E-BP. These results are corroborated in vivo using transgenic 5' UTR reporters. These observations indicate that ATF4-induced 4e-bp contributes to innate immunity by biasing mRNA translation toward cap-independent mechanisms, thus enhancing AMP synthesis.

Indexed as

Activating Transcription Factor 4AnimalsAnti-Infective AgentsBacterial InfectionsCarrier ProteinsDrosophilaDrosophila ProteinsEukaryotic Initiation Factor-4EIntracellular Signaling Peptides and ProteinsPhosphorylationProtein BindingProtein BiosynthesisProtein KinasesSignal TransductionActivating Transcription Factor 4Anti-Infective AgentsCarrier Proteinscup protein, DrosophilaDrosophila ProteinsEukaryotic Initiation Factor-4EGCN2 protein, DrosophilaIntracellular Signaling Peptides and ProteinsProtein Kinases4E-BP5'antimicrobial peptidesATF4GCN2innate immunityinternal ribosome entry sitemRNA translationUTR

Identifiers

PMID29166596
PMCPMC5728446
OpenAlexW2769149807

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.