Evidence map›Paper›PMID 29165701›Full record

ArticleNucleic acids research2017

The mechano-chemistry of a monomeric reverse transcriptase.

Omri Malik, Hadeel Khamis, Sergei Rudnizky, Ariel Kaplan

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The Manipulation of RNA-Guided Nucleic Acid Cleavage with Ninhydrin Chemistry.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Omri MalikFaculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Hadeel KhamisFaculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Sergei RudnizkyFaculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.
Ariel KaplanFaculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retroviral reverse transcriptase catalyses the synthesis of an integration-competent dsDNA molecule, using as a substrate the viral RNA. Using optical tweezers, we follow the Murine Leukemia Virus reverse transcriptase as it performs strand-displacement polymerization on a template under mechanical force. Our results indicate that reverse transcriptase functions as a Brownian ratchet, with dNTP binding as the rectifying reaction of the ratchet. We also found that reverse transcriptase is a relatively passive enzyme, able to polymerize on structured templates by exploiting their thermal breathing. Finally, our results indicate that the enzyme enters the recently characterized backtracking state from the pre-translocation complex.

Indexed as

AlgorithmsModels, ChemicalDeoxyribonucleotidesDNA, ViralKineticsLeukemia Virus, MurineOptical TweezersPolymerizationRNA-Directed DNA PolymeraseRNA, ViralTemplates, GeneticThermodynamicsDeoxyribonucleotidesDNA, ViralRNA-Directed DNA PolymeraseRNA, Viral

Identifiers

PMID29165701
PMCPMC5728418

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.