Evidence map›Paper›PMID 29165424›Full record

ReviewNature reviews. Molecular cell biology2018

Functional 5' UTR mRNA structures in eukaryotic translation regulation and how to find them.

Kathrin Leppek, Rhiju Das, Maria Barna

Erratum issuedOpen access · greenAbstract readReview
In one paragraph

Review in Nature reviews. Molecular cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 575 papers.

0numbers the graph read from it
0cells of the map it votes in
575citing papers in PubMed
24.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

575 citing papers in PubMed, 944 citations in OpenAlex.

  1. Article
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  6. A new conditional mouse model for Cre-mediated restoration ofbioRxiv : the preprint server for biology · 2026
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515 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kathrin LeppekDepartment of Developmental Biology, Stanford University, Stanford, California 94305, USA.
Rhiju DasDepartments of Biochemistry and Physics, Stanford University, Stanford, California 94305, USA.
Maria BarnaDepartment of Developmental Biology, Stanford University, Stanford, California 94305, USA.
Stanford University · US

Funding

Next-generation computational/chemical methods for complex RNA structuresR35GM122579 · NIGMS · STANFORD UNIVERSITY · PI Rhiju Das · 2017 to 2026
$7.2M
Specialized Translational Control of Stem Cell Differentiation and Embryonic DevelopmentR01HD086634 · NICHD · STANFORD UNIVERSITY · PI BARNA, MARIA · 2016 to 2025
$5.5M
Non-coding RNA Structure through a Mutate-and-Map StrategyR01GM102519 · NIGMS · STANFORD UNIVERSITY · PI DAS, RHIJU · 2012 to 2016
$1.5M
Characterizing the ribosome code controlling gene expression and cell fate specificationR21HD086730 · NICHD · STANFORD UNIVERSITY · PI BARNA, MARIA · 2016 to 2017
$431k
NICHD NIH HHS R01 HD086634NICHD NIH HHS R21 HD086730NIGMS NIH HHS R01 GM102519NIGMS NIH HHS R35 GM122579
6 · The paper itself

Abstract

RNA molecules can fold into intricate shapes that can provide an additional layer of control of gene expression beyond that of their sequence. In this Review, we discuss the current mechanistic understanding of structures in 5' untranslated regions (UTRs) of eukaryotic mRNAs and the emerging methodologies used to explore them. These structures may regulate cap-dependent translation initiation through helicase-mediated remodelling of RNA structures and higher-order RNA interactions, as well as cap-independent translation initiation through internal ribosome entry sites (IRESs), mRNA modifications and other specialized translation pathways. We discuss known 5' UTR RNA structures and how new structure probing technologies coupled with prospective validation, particularly compensatory mutagenesis, are likely to identify classes of structured RNA elements that shape post-transcriptional control of gene expression and the development of multicellular organisms.

Indexed as

5' Untranslated RegionsAnimalsEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4FG-QuadruplexesHumansInternal Ribosome Entry SitesModels, BiologicalModels, MolecularPeptide Chain Initiation, TranslationalProtein BiosynthesisRibosomesRNA FoldingRNA HelicasesRNA, Messenger5' Untranslated RegionsEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4FInternal Ribosome Entry SitesRNA HelicasesRNA, Messenger

Identifiers

PMID29165424
PMCPMC5820134
OpenAlexW2770378609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.