Evidence map›Paper›PMID 29164452›Full record

ArticleFish physiology and biochemistry2018

Identification of suh gene and evidence for involvement of notch signaling pathway on gonadal differentiation of Yellow River carp (Cyprinus carpio).

Yongfang Jia, Fang Wang, Ruihua Zhang, Tingting Liang, WanWan Zhang, Xiaolin Ji, Qiyan Du, Zhongjie Chang

Abstract read
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In one paragraph

Article in Fish physiology and biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yongfang JiaCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Fang WangCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Ruihua ZhangCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Tingting LiangCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
WanWan ZhangCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Xiaolin JiCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Qiyan DuCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China.
Zhongjie ChangCollege of Life Science, Henan Normal University, 46# East of Construction Road, Xinxiang, Henan, 453007, People's Republic of China. 13837331530@163.com.
Henan Normal University · CN

Funding

Innovative Research Team (in Science and Technology) in University of Henan Province 17IRTSTHN017Scientific and Technological Research Projects of Henan Province 182300410164
6 · The paper itself

Abstract

The suh gene is crucial in Notch pathway and regulates mammalian gonad development. In this study, the sequences of suh1 and suh2 genes in Yellow River carp (Cyprinus carpio) were verified. The partial 5'-flanking regions of suh1 and suh2 were analyzed and several potential transcription factor-binding sites were identified. Phylogenetic, gene structure, and chromosome synteny analyses revealed that carp suh1 and suh2 were orthologs and homologous to vertebrate suh. Investigation of the expression profiles of suh1 and suh2 with qPCR showed that these genes were abundant in the brain and gonad of carp, with suh1 exhibiting sexual dimorphism expression pattern in gonad. To study the relationship between gonad differentiation and Notch signaling, primordial gonads were exposed to DAPT, an inhibitor of Notch signaling, in vitro and in vivo. The results revealed a significant downregulation of suh1 and other Notch genes in vitro. In addition, expression of male-biased genes, such as amh, dmrt1, etc., was downregulated, whereas that of female-biased genes, such as foxl2, gdf9, etc., was upregulated. When the primordial gonads were subjected to long-term DAPT exposure, an increased proportion of ovary and delay in testis development were observed. These results suggest that suh gene may have a conservative function between teleosts and mammals. Furthermore, Notch signaling was found to be involved in gonad differentiation in Yellow River carp, and DAPT was noted to inhibit and enhance the expression of male- and female-biased genes, respectively, and induce the increase in number of females.

Indexed as

AnimalsCarpsChromosome MappingChromosomesFemaleGene Expression Regulation, DevelopmentalGenomicsGonadsMalePhylogenyReceptors, NotchSignal TransductionSyntenyReceptors, NotchDAPTGonadal developmentNotch signaling pathwaysuh1suh2Yellow River carp (Cyprinus carpio)

Identifiers

PMID29164452
OpenAlexW2770813657

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.