Evidence map›Paper›PMID 29164367›Full record

ArticlePlanta2018

Mannans and endo-β-mannanase transcripts are located in different seed compartments during Brassicaceae germination.

Néstor Carrillo-Barral, Angel J Matilla, María Del Carmen Rodríguez-Gacio, Raquel Iglesias-Fernández

Abstract read
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In one paragraph

Article in Planta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Heterologous expression ofFrontiers in plant science · 2023
    Article
  5. Article
  6. A Possible Role of the Aleurone Expressed GeneFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Néstor Carrillo-BarralDepartamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15780, Santiago de Compostela, Spain.
Angel J MatillaDepartamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15780, Santiago de Compostela, Spain.
María Del Carmen Rodríguez-GacioDepartamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15780, Santiago de Compostela, Spain.
Raquel Iglesias-FernándezCentro de Biotecnología y Genómica de Plantas (UPM-INIA), Universidad Politécnica de Madrid, Campus de Montegancedo, Pozuelo de Alarcón, 28223, Madrid, Spain. raquel.iglesias@upm.es.ORCID http://orcid.org/0000-0003-4773-7176
Universidade de Santiago de Compostela · ESCentre for Plant Biotechnology and Genomics · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionMannans but not endo-β-mannanases are mainly found in the mucilage layer of two Brassicaceae seeds. Nonetheless, mannanase mobilization from inner to outer seed layers cannot be ruled out. The contribution of endo-β-mannanase (MAN) genes to the germination of the wild-type Sisymbrium officinale and cultivated Brassica rapa (Brassicaceae) species has been explored. In both species, mannans have been localized to the imbibed external seed coat layer (mucilage) by fluorescence immunolocalization and MAN enzymatic activity increases in seeds as imbibition progresses, reaching a peak before 100% germination is achieved. The MAN gene families have been annotated and the expression of their members analyzed in vegetative and reproductive organs. In S. officinale and B. rapa, MAN2, MAN5, MAN6, and MAN7 transcripts accumulate upon seed imbibition. SoMAN7 is the most expressed MAN gene in S. officinale germinating seeds, as occurs with its ortholog in Arabidopsis thaliana, but in B. rapa, the most abundant transcripts are BrMAN2 and BrMAN5. These genes (MAN2, MAN5, MAN6, and MAN7) are localized, by mRNA in situ hybridization, to the micropylar at the endosperm layer and to the radicle in S. officinale, but in B. rapa, these mRNAs are faintly found to the micropylar living seed coat layer and are mainly present at the radicle tip and the vascular bundles. If the domestication process undergone by B. rapa is responsible for these different MAN expression patterns, upon germination remains to be elucidated. Since mannans and MAN genes are not spatially distributed in the same seed tissues, a movement of MAN enzymes that are synthesized with typical signal peptides from the embryo tissues to the mucilage layer (via apoplastic space) is necessary for the mannans to be hydrolyzed.

Indexed as

GerminationBrassicaceaeBrassica rapaGenes, PlantMannansMannosidasesPhylogenySeedsendo-1,4-beta-D-mannanaseMannansMannosidasesBrassica rapaEndo-β-mannanaseGerminationMannansMucilageSeedSisymbrium officinale

Identifiers

PMID29164367
OpenAlexW2769834025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.