Evidence map›Paper›PMID 29163049›Full record

ArticleFrontiers in cellular neuroscience2017

Tagging of Endogenous BK Channels with a Fluorogen-Activating Peptide Reveals β4-Mediated Control of Channel Clustering in Cerebellum.

Christopher P Pratt, Dika A Kuljis, Gregg E Homanics, Jianjun He, Dmytro Kolodieznyi, Srikanth Dudem, Mark A Hollywood, Alison L Barth, Marcel P Bruchez

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Temporally and spatially partitioned neuropeptide release from individual clock neurons.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. BK Channel Regulation of Afterpotentials and Burst Firing in Cerebellar Purkinje Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  4. Review
  5. Article
  6. Gene-edited CRISPy Critters for alcohol research.Alcohol (Fayetteville, N.Y.) · 2019
    Review
  7. Effects of Single Nucleotide Polymorphisms in HumanFrontiers in molecular neuroscience · 2019
    Article
  8. Diazepam Accelerates GABAFrontiers in cellular neuroscience · 2019
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Christopher P PrattDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Dika A KuljisDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Gregg E HomanicsDepartment of Anesthesiology, University of Pittsburgh, Pittsburgh, PA, United States.
Jianjun HeMolecular Biosensor and Imaging Center, Carnegie Mellon University, Pittsburgh, PA, United States.
Dmytro KolodieznyiMolecular Biosensor and Imaging Center, Carnegie Mellon University, Pittsburgh, PA, United States.
Srikanth DudemSmooth Muscle Research Centre, Dundalk Institute of Technology, Dundalk, Ireland.
Mark A HollywoodSmooth Muscle Research Centre, Dundalk Institute of Technology, Dundalk, Ireland.
Alison L BarthDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Marcel P BruchezDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA, United States.
Carnegie Mellon University · USDundalk Institute of Technology · IECenter for the Neural Basis of Cognition · USImaging Center · USUniversity of Pittsburgh · US

Funding

Role of noncoding RNA in alcohol actionU01AA020889 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Sean P Farris, Gregg E. Homanics · 2011 to 2026
$7.1M
Training in the Neurobiology of Neurological DiseaseT32NS086749 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Omar El Gharbawie, REBECCA P SEAL · 2014 to 2026
$4.8M
Brain-scale measurements of cell-specific synaptic contactsR21NS092019 · NINDS · CARNEGIE-MELLON UNIVERSITY · PI BARTH, ALISON L, BRUCHEZ, MARCEL P · 2015 to 2016
$424k
NIAAA NIH HHS U01 AA020889NINDS NIH HHS R21 NS092019NINDS NIH HHS T32 NS086749
6 · The paper itself

Abstract

BK channels are critical regulators of neuronal activity, controlling firing, neurotransmitter release, cerebellar function, and BK channel mutations have been linked to seizure disorders. Modulation of BK channel gating is well characterized, regulated by accessory subunit interactions, intracellular signaling pathways, and membrane potential. In contrast, the role of intracellular trafficking mechanisms in controlling BK channel function, especially in live cells, has been less studied. Fluorogen-activating peptides (FAPs) are well-suited for trafficking and physiological studies due to the binding of malachite green (MG)-based dyes with sub-nanomolar affinity to the FAP, resulting in bright, photostable, far-red fluorescence. Cell-excluded MG dyes enable the selective tagging of surface protein and tracking through endocytic pathways. We used CRISPR to insert the FAP at the extracellular N-terminus of BKα in the first exon of its native locus, enabling regulation by the native promoter elements and tag incorporation into multiple splice isoforms. Motor coordination was found to be normal; however, BK channel expression seems to be reduced in some locations. Alternate start site selection or post-translational proteolytic processing resulted in incomplete FAP tagging of the BKα proteins in brain tissues. In Purkinje cell somata, FAP revealed BK channel clustering previously only observed by electron microscopy. Measurement of these clusters in β4

Indexed as

BK channelsCRISPR/Cas9fluorescent dyesfluorogen-activating peptidesknock-inPurkinje cellstrafficking

Identifiers

PMID29163049
PMCPMC5671578
OpenAlexW2766624035

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.