ArticleScientific reports2017
The LATERAL ORGAN BOUNDARIES Domain gene family in grapevine: genome-wide characterization and expression analyses during developmental processes and stress responses.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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31 citing papers in PubMed, 56 citations in OpenAlex.
- Pangenomic analyses in the cultivated grapevine confirm high genomic collinearity and extensive dispensable gene content likely involved in adaptation.G3 (Bethesda, Md.) · 2026Article
- Laminar patterning transcription factors orchestrate spatial metabolite partitioning in Capsicum fruit.Nature plants · 2026Article
- Genome-Wide Identification and Expression Analysis of the AS2/LOB Transcription Factor Family inGenes · 2025Article
- Nontoxic mesoporous silica nanoparticles protect Physcomitrium patens against salt stress.Stress biology · 2025Article
- The lncRNA LOC100257036 and vvimiR156 modulate gibberellin signaling through AGAMOUS during cluster formation in Sistan Yaghooti grape.Scientific reports · 2025Article
- Identification and Characterization of LBD Gene Family in Pseudoroegneria libanotica Reveals Functions of PseLBD1 and PseLBD12 in Response to Abiotic Stress.Biochemical genetics · 2025Article
- Article
- Integration of ATAC-Seq and RNA-Seq Reveals the Role ofInternational journal of molecular sciences · 2025Article
- Deciphering the regulatory networks involved in mild and severe salt stress responses in the roots of wild grapevine Vitis vinifera spp. sylvestris.Protoplasma · 2024Article
- Characterization and expression profiles of the ZmLBD gene family in Zea mays.Molecular biology reports · 2024Article
- Regulatory mechanisms of the LBD40 transcription factor inPlant direct · 2023Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2023Article
- Uncovering transcriptional reprogramming during callus development in soybean: insights and implications.Frontiers in plant science · 2023Article
- Genome-wide identification and expression analysis of the HD2 protein family and its response to drought and salt stress inFrontiers in plant science · 2023Article
- Article
- Genome-Wide Analysis of Soybean Lateral Organ Boundaries Domain Gene Family Reveals the Role inFrontiers in plant science · 2022Article
- Genetic analysis of grapevine root system architecture and loci associated gene networks.Frontiers in plant science · 2022Article
- Genome-Wide Identification and Expression Profiling ofFrontiers in plant science · 2022Article
- Insights into Regulation of CInternational journal of molecular sciences · 2021Article
- Article
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Authors and funding
5 authors at 2 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
LATERAL ORGAN BOUNDARIES (LOB) DOMAIN (LBD) constitute a family of plant-specific transcription factors with key roles in the regulation of plant organ development, pollen development, plant regeneration, pathogen response, and anthocyanin and nitrogen metabolisms. However, the role of LBDs in fruit ripening and in grapevine (Vitis vinifera L.) development and stress responses is poorly documented. By performing a model curation of LBDs in the latest genome annotation 50 genes were identified. Phylogenetic analysis showed that LBD genes can be grouped into two classes mapping on 16 out of the 19 V. vinifera chromosomes. New gene subclasses were identified that have not been characterized in other species. Segmental and tandem duplications contributed significantly to the expansion and evolution of the LBD gene family in grapevine as noticed for other species. The analysis of cis-regulatory elements and transcription factor binding sites in the VviLBD promoter regions suggests the involvement of several hormones in the regulation of LBDs expression. Expression profiling suggest the involvement of LBD transcription factors in grapevine development, berry ripening and stress responses. Altogether this study provides valuable information and robust candidate genes for future functional analysis aiming to clarify mechanisms responsible for the onset of fruit ripening and fruit defense strategies.
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