Evidence map›Paper›PMID 29162888›Full record

ArticleScientific reports2017

miR-500a-5p regulates oxidative stress response genes in breast cancer and predicts cancer survival.

Davide Degli Esposti, Vasily N Aushev, Eunjee Lee, Marie-Pierre Cros, Jun Zhu, Zdenko Herceg, Jia Chen, Hector Hernandez-Vargas

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Using the Precision Lasso for gene selection in diffuse large B cell lymphoma cancer.Journal of the Egyptian National Cancer Institute · 2023
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  3. Review
  4. Direct Effects of Glyphosate onFrontiers in immunology · 2022
    Article
  5. Review
  6. Article
  7. Micro RNAs in Regulation of Cellular Redox Homeostasis.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Davide Degli EspostiEpigenetics Group. International Agency for Research on Cancer (IARC), 150 Cours Albert-Thomas, 69008, Lyon, France.
Vasily N AushevDepartment of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, United States of America.ORCID 0000-0001-8003-358X
Eunjee LeeDepartment of Genetics and Genomic Sciences, Icahn Institute of Genomics and Multiscale Biology, New York, NY, 10029, United States of America.
Marie-Pierre CrosEpigenetics Group. International Agency for Research on Cancer (IARC), 150 Cours Albert-Thomas, 69008, Lyon, France.
Jun ZhuDepartment of Genetics and Genomic Sciences, Icahn Institute of Genomics and Multiscale Biology, New York, NY, 10029, United States of America.ORCID 0000-0003-0834-8178
Zdenko HercegEpigenetics Group. International Agency for Research on Cancer (IARC), 150 Cours Albert-Thomas, 69008, Lyon, France.
Jia ChenDepartment of Environmental Medicine and Public Health, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, United States of America. jia.chen@mssm.edu.
Hector Hernandez-VargasEpigenetics Group. International Agency for Research on Cancer (IARC), 150 Cours Albert-Thomas, 69008, Lyon, France. vargash@iarc.fr.
Centre international de recherche sur le cancer · FRIcahn School of Medicine at Mount Sinai · US

Funding

The Mount Sinai Transdisciplinary Center on Early Environmental ExposuresP30ES023515 · NIEHS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Robert O Wright · 2014 to 2026
$21.3M
MicroRNA & Breast Cancer: Functional Characterization in a Population-Based StudyR01CA172460 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHEN, JIA · 2013 to 2017
$3.2M
Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC SupercomputerS10OD018522 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2014 to 2014
$1.9M
Developing methods for curating multi-omics dataU01HG008451 · NHGRI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZHU, JUN · 2015 to 2017
$1.5M
NCI NIH HHS R01 CA172460NHGRI NIH HHS U01 HG008451NIEHS NIH HHS P30 ES023515NIH HHS S10 OD018522World Health Organization 001
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small regulatory non-coding RNAs with a diversity of cellular functions, and are frequently dysregulated in cancer. Using a novel computational method (ActMir) that we recently developed, the "activity" of miRNA hsa-miR-500a was implicated in estrogen receptor (ER) positive breast cancer; however its targets and functional impact remain poorly understood. Here, we performed an extensive gene expression analysis in ER+ breast cancer cell lines, to reveal the targets of miR-500a-5p after experimental modulation of its levels. We found that among mRNAs targeted by miR-500a-5p there was enrichment in oxidative stress response genes. Moreover, in vitro exposure to oxidative stress using H

Indexed as

Gene Expression Regulation, NeoplasticBreast NeoplasmsCell Line, TumorFemaleGenome, HumanHumansMicroRNAsOxidative StressReceptors, EstrogenSurvival AnalysisTranscription, GeneticMicroRNAsMIRN500 microRNA, humanReceptors, Estrogen

Identifiers

PMID29162888
PMCPMC5698490
OpenAlexW2769336524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.