Evidence map›Paper›PMID 29158552›Full record

ArticleEuropean journal of human genetics : EJHG2017

Care and cost consequences of pediatric whole genome sequencing compared to chromosome microarray.

Robin Z Hayeems, Jasmin Bhawra, Kate Tsiplova, M Stephen Meyn, Nasim Monfared, Sarah Bowdin, D James Stavropoulos, Christian R Marshall, Raveen Basran, Cheryl Shuman and 8 more

Abstract readComparative Study
In one paragraph

Article in European journal of human genetics : EJHG, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. A systematic review of the methodological quality of economic evaluations in genetic screening and testing for monogenic disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Genetics of liver disease in adults.Hepatology communications · 2024
    Review
  6. Physician services and costs after disclosure of diagnostic sequencing results in the NYCKidSeq program.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  7. Exome/Genome Sequencing in Undiagnosed Syndromes.Annual review of medicine · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Cost-effectiveness of genome-wide sequencing for unexplained developmental disabilities and multiple congenital anomalies.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Long-term economic impacts of exome sequencing for suspected monogenic disorders: diagnosis, management, and reproductive outcomes.Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
  19. Article
  20. Genome-wide sequencing in acutely ill infants: genomic medicine's critical application?Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Robin Z HayeemsChild Health Evaluative Sciences, The Hospital for Sick Children, Toronto, Canada. robin.hayeems@sickkids.ca.
Jasmin BhawraSchool of Public Health and Health Systems, University of Waterloo, Waterloo, Canada.
Kate TsiplovaChild Health Evaluative Sciences, The Hospital for Sick Children, Toronto, Canada.
M Stephen MeynDivision of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, Canada.ORCID http://orcid.org/0000-0001-6444-2607
Nasim MonfaredDivision of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, Canada.
Sarah BowdinDivision of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, Canada.
D James StavropoulosDepartment of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada.
Christian R MarshallDepartment of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada.
Raveen BasranDepartment of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, Canada.
Cheryl ShumanDivision of Clinical and Metabolic Genetics, The Hospital for Sick Children, Toronto, Canada.
Shinya ItoDivision of Clinical Pharmacology and Toxicology, The Hospital for Sick Children, Toronto, Canada.
Iris CohnDivision of Clinical Pharmacology and Toxicology, The Hospital for Sick Children, Toronto, Canada.
Courtney HumPrenatal Diagnosis and Medical Genetics Program, Sinai Health System, Toronto, Canada.
Marta GirdeaCentre for Computational Medicine, The Hospital for Sick Children, Toronto, Canada.
Michael BrudnoCentre for Computational Medicine, The Hospital for Sick Children, Toronto, Canada.
Ronald D CohnDepartment of Molecular Genetics, University of Toronto, Toronto, Canada.
Stephen W SchererDepartment of Molecular Genetics, University of Toronto, Toronto, Canada.
Wendy J UngarChild Health Evaluative Sciences, The Hospital for Sick Children, Toronto, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clinical use of whole-genome sequencing (WGS) is expected to alter pediatric medical management. The study aimed to describe the type and cost of healthcare activities following pediatric WGS compared to chromosome microarray (CMA). Healthcare activities prompted by WGS and CMA were ascertained for 101 children with developmental delay over 1 year. Activities following receipt of non-diagnostic CMA were compared to WGS diagnostic and non-diagnostic results. Activities were costed in 2016 Canadian dollars (CDN). Ongoing care accounted for 88.6% of post-test activities. The mean number of lab tests was greater following CMA than WGS (0.55 vs. 0.09; p = 0.007). The mean number of specialist visits was greater following WGS than CMA (0.41 vs. 0; p = 0.016). WGS results (diagnostic vs. non-diagnostic) modified the effect of test type on mean number of activities (p < 0.001). The cost of activities prompted by diagnostic WGS exceeded $557CDN for 10% of cases. In complex pediatric care, CMA prompted additional diagnostic investigations while WGS prompted tailored care guided by genotypic variants. Costs for prompted activities were low for the majority and constitute a small proportion of total test costs. Optimal use of WGS depends on robust evaluation of downstream care and cost consequences.

Indexed as

Costs and Cost AnalysisCanadaChildGenetic TestingHumansOligonucleotide Array Sequence AnalysisWhole Genome Sequencing

Identifiers

PMID29158552
PMCPMC5865210

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.