Evidence map›Paper›PMID 29157957›Full record

ArticleVaccine2017

Selection of vaccine strains for serotype O foot-and-mouth disease viruses (2007-2012) circulating in Southeast Asia, East Asia and Far East.

Mana Mahapatra, Sasmita Upadhyaya, Sharie Aviso, Aravindh Babu, Geoff Hutchings, Satya Parida

Open access · hybridAbstract read
In one paragraph

Article in Vaccine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
9.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 47 citations in OpenAlex.

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  16. The emergence ofJournal of advanced veterinary and animal research · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Mana MahapatraThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK.
Sasmita UpadhyayaThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK.
Sharie AvisoThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK; School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch 6150, Australia.
Aravindh BabuThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK.
Geoff HutchingsThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK.
Satya ParidaThe Pirbright Institute, Ash Road, Pirbright, Surrey GU24 ONF, UK; School of Veterinary and Biomedical Sciences, Murdoch University, Murdoch 6150, Australia. Electronic address: satya.parida@pirbright.ac.uk.
The Pirbright Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F009186/1Biotechnology and Biological Sciences Research Council BB/H009175/1Biotechnology and Biological Sciences Research Council BB/J004375/1Biotechnology and Biological Sciences Research Council BB/N012682/1Biotechnology and Biological Sciences Research Council BBS/E/I/00007019Biotechnology and Biological Sciences Research Council BBS/E/I/00007031Biotechnology and Biological Sciences Research Council BBS/E/I/00007034Biotechnology and Biological Sciences Research Council BBS/E/I/00007037Biotechnology and Biological Sciences Research Council BBS/E/I/00007039
6 · The paper itself

Abstract

Foot-and-mouth disease (FMD) is endemic in Southeast Asia (SEA) and East Asia with circulation of multiple serotypes and multiple genotypes within each serotype of the virus. Although countries like Japan and South Korea in the Far East were free of FMD, in 2010 FMD serotype O (O/Mya-98) outbreaks were recorded and since then South Korea has experienced several FMD outbreaks despite regular vaccination. In this study a total of 85 serotype O FMD viruses (FMDV) isolated from 2007 to 2012 from SEA, East Asia and Far East were characterized by virus neutralisation tests using antisera to four existing (O/HKN/6/83, O/IND/R2/75, O/SKR/2010 and O/PanAsia-2) and one putative (O/MYA/2009) vaccine strains, and by full capsid sequencing. Serological studies revealed broad cross-reactivity with the vaccine strains; O/PanAsia-2 exhibited a good match with 95.3%, O/HKN/6/83 with 91.8%, O/IND/R2/75 with 80%, and the putative strain O/MYA/2009 with 89.4% isolates employed in this study. Similarly O/PanAsia-2 and O/IND/R2/75 vaccines showed a good match with all eight viruses belonging to O-Ind-2001d sublineage whereas the vaccines of O/Mya-98 lineage, O/MYA/2009 and O/SKR/2010 exhibited the lowest match indicating their unsuitability to protect infections from O-Ind-2001d viruses. A Bayesian analysis of the capsid sequence data indicated these circulating viruses (n = 85) to be of either SEA or Middle East-South Asian (ME-SA) topotype. The ME-SA topotype viruses were mainly detected in Lao PDR, Vietnam, Myanmar and Thailand reflecting the trade links with the Indian subcontinent, and also within the SEA countries. Implications of these results in the context of FMD control in SEA and East Asian countries are discussed.

Indexed as

SerogroupAnimalsAntigens, ViralAsia, EasternAsia, SoutheasternBayes TheoremCapsid ProteinsCattleCross ReactionsDisease OutbreaksFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusNeutralization TestsPhylogenyVaccinationViral VaccinesAntigens, ViralCapsid ProteinsViral VaccinesEast AsiaFar EastFMDSerotype OSoutheast AsiaVaccine strain selection

Identifiers

PMID29157957
PMCPMC5720463
OpenAlexW2770678651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.