Evidence map›Paper›PMID 29156552›Full record

ArticleViruses2017

Diversity of dsDNA Viruses in a South African Hot Spring Assessed by Metagenomics and Microscopy.

Olivier Zablocki, Leonardo Joaquim van Zyl, Bronwyn Kirby, Marla Trindade

Erratum issuedAbstract read
In one paragraph

Article in Viruses, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. The Expanding Diversity of Viruses from Extreme Environments.International journal of molecular sciences · 2024
    Review
  4. Exploring the Archaeal Virosphere by Metagenomics.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  5. The Diversity of Bacteriophages in Hot Springs.Methods in molecular biology (Clifton, N.J.) · 2024
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Olivier ZablockiInstitute for Microbial Biotechnology and Metagenomics, Department of Biotechnology, University of the Western Cape, 7535 Bellville, South Africa. olivier.zablo@gmail.com.ORCID 0000-0001-7561-1373
Leonardo Joaquim van ZylInstitute for Microbial Biotechnology and Metagenomics, Department of Biotechnology, University of the Western Cape, 7535 Bellville, South Africa. vanzyllj@gmail.com.
Bronwyn KirbyInstitute for Microbial Biotechnology and Metagenomics, Department of Biotechnology, University of the Western Cape, 7535 Bellville, South Africa. bkirby@uwc.ac.za.
Marla TrindadeInstitute for Microbial Biotechnology and Metagenomics, Department of Biotechnology, University of the Western Cape, 7535 Bellville, South Africa. ituffin@uwc.ac.za.ORCID 0000-0002-2478-0270

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The current view of virus diversity in terrestrial hot springs is limited to a few sampling sites. To expand our current understanding of hot spring viral community diversity, this study aimed to investigate the first African hot spring (Brandvlei hot spring; 60 °C, pH 5.7) by means of electron microscopy and sequencing of the virus fraction. Microscopy analysis revealed a mixture of regular- and 'jumbo'-sized tailed morphotypes (

Indexed as

Genetic VariationGenome, ViralArchaeaArchaeal VirusesBacteriophagesDNA VirusesHot SpringsMetagenomicsMicroscopy, ElectronPhylogenyVirionarchaeal virusesfreshwater cyanophagesFuselloviridaeGemmatahot springjumbo phagemetavirome

Identifiers

PMID29156552
PMCPMC5707555

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.