ArticleNucleic acids research2018
PRGdb 3.0: a comprehensive platform for prediction and analysis of plant disease resistance genes.
Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.
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Who cites it
94 citing papers in PubMed.
- A haplotype-resolved, chromosome-scale genome assembly and annotation for Carya glabra (pignut hickory; Juglandaceae).G3 (Bethesda, Md.) · 2026Article
- Comparative analysis of ABC, LTP, and WAK families in non-specific immunity of wheat and sunflower.Scientific reports · 2026Article
- Accelerating Resistance Breeding: Emerging Methods to Identify and Validate Plant Immunity Genes.Plants (Basel, Switzerland) · 2026Review
- Article
- Whole-genome sequencing of wild and ancestral Dura provides insight into the untapped genomic information of undomesticated oil palm (Elaeis guineensis Jacq.).DNA research : an international journal for rapid publication of reports on genes and genomes · 2025Article
- Advances in grape and pathogen genomics toward durable grapevine disease resistance.Journal of experimental botany · 2025Review
- Genomic structure of yellow lupin (Lupinus luteus): genome organization, evolution, gene family expansion, metabolites and protein synthesis.BMC genomics · 2025Article
- Melanaphis sacchari/sorghi complex: current status, challenges and integrated strategies for managing the invasive sap-feeding insect pest of sorghum.Pest management science · 2025Review
- Presence of disease resistance genes in tomato germplasm revealed by gene-based or gene-linked molecular markers.Molecular breeding : new strategies in plant improvement · 2025Article
- Chromosome-level genome assembly and improved annotation of onion genome (Allium cepa L.).Scientific data · 2025Article
- Genome architecture of the allotetraploid wild grass Aegilops ventricosa reveals its evolutionary history and contributions to wheat improvement.Plant communications · 2025Article
- Resistify: A Novel NLR Classifier That Reveals Helitron-Associated NLR Expansion in Solanaceae.Bioinformatics and biology insights · 2025Article
- Telomere-to-telomere Citrullus super-pangenome provides direction for watermelon breeding.Nature genetics · 2024Article
- A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance.G3 (Bethesda, Md.) · 2024Article
- Transcriptome Analysis Reveals Key Genes Involved in Trichome Formation in PepperPlants (Basel, Switzerland) · 2024Article
- Genome-wide analysis of the peanut CaM/CML gene family reveals that the AhCML69 gene is associated with resistance to Ralstonia solanacearum.BMC genomics · 2024Article
- Contrasting plant transcriptome responses between a pierce-sucking and a chewing herbivore go beyond the infestation site.BMC plant biology · 2024Article
- Transcriptome profile of pecan scab resistant and susceptible trees from a pecan provenance collection.BMC genomics · 2024Article
- Transcriptome analysis in Aegilops tauschii unravels further insights into genetic control of stripe rust resistance.Planta · 2024Article
- Genomic evolution and insights into agronomic trait innovations of Sesamum species.Plant communications · 2024Article
34 more citing papers are in PubMed but not listed here.
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Plant Resistance Genes database (PRGdb; http://prgdb.org) has been redesigned with a new user interface, new sections, new tools and new data for genetic improvement, allowing easy access not only to the plant science research community but also to breeders who want to improve plant disease resistance. The home page offers an overview of easy-to-read search boxes that streamline data queries and directly show plant species for which data from candidate or cloned genes have been collected. Bulk data files and curated resistance gene annotations are made available for each plant species hosted. The new Gene Model view offers detailed information on each cloned resistance gene structure to highlight shared attributes with other genes. PRGdb 3.0 offers 153 reference resistance genes and 177 072 annotated candidate Pathogen Receptor Genes (PRGs). Compared to the previous release, the number of putative genes has been increased from 106 to 177 K from 76 sequenced Viridiplantae and algae genomes. The DRAGO 2 tool, which automatically annotates and predicts (PRGs) from DNA and amino acid with high accuracy and sensitivity, has been added. BLAST search has been implemented to offer users the opportunity to annotate and compare their own sequences. The improved section on plant diseases displays useful information linked to genes and genomes to connect complementary data and better address specific needs. Through, a revised and enlarged collection of data, the development of new tools and a renewed portal, PRGdb 3.0 engages the plant science community in developing a consensus plan to improve knowledge and strategies to fight diseases that afflict main crops and other plants.
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