Evidence map›Paper›PMID 29155837›Full record

ArticlePloS one2017

Reduced order modeling and analysis of the human complement system.

Adithya Sagar, Wei Dai, Mason Minot, Rachel LeCover, Jeffrey D Varner

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Multiscale Solutions to Quantitative Systems Biology Models.Frontiers in molecular biosciences · 2019
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adithya SagarRobert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, United States of America.
Wei DaiRobert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, United States of America.
Mason MinotRobert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, United States of America.
Rachel LeCoverRobert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, United States of America.
Jeffrey D VarnerRobert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, United States of America.ORCID http://orcid.org/0000-0002-2558-7026

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Complement is an important pathway in innate immunity, inflammation, and many disease processes. However, despite its importance, there are few validated mathematical models of complement activation. In this study, we developed an ensemble of experimentally validated reduced order complement models. We combined ordinary differential equations with logical rules to produce a compact yet predictive model of complement activation. The model, which described the lectin and alternative pathways, was an order of magnitude smaller than comparable models in the literature. We estimated an ensemble of model parameters from in vitro dynamic measurements of the C3a and C5a complement proteins. Subsequently, we validated the model on unseen C3a and C5a measurements not used for model training. Despite its small size, the model was surprisingly predictive. Global sensitivity and robustness analysis suggested complement was robust to any single therapeutic intervention. Only the simultaneous knockdown of both C3 and C5 consistently reduced C3a and C5a formation from all pathways. Taken together, we developed a validated mathematical model of complement activation that was computationally inexpensive, and could easily be incorporated into pre-existing or new pharmacokinetic models of immune system function. The model described experimental data, and predicted the need for multiple points of therapeutic intervention to fully disrupt complement activation.

Indexed as

Immunity, InnateModels, TheoreticalComplement ActivationComplement C3Complement C3aComplement C5Complement C5aGene Knockdown TechniquesHumansInflammationLectinsPharmacokineticsComplement C3Complement C3aComplement C5Complement C5aLectins

Identifiers

PMID29155837
PMCPMC5695804

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.