Evidence map›Paper›PMID 29153837›Full record

ArticleCell2017

A Method for the Acute and Rapid Degradation of Endogenous Proteins.

Dean Clift, William A McEwan, Larisa I Labzin, Vera Konieczny, Binyam Mogessie, Leo C James, Melina Schuh

Open access · hybridAbstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 309 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
309citing papers in PubMed, 1 pooled it
16.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

309 citing papers in PubMed, 1 synthesis or guideline pooled it, 525 citations in OpenAlex.

  1. Pooled it
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  9. Molecular biology of the cell · 2026
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249 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Dean CliftMedical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK. Electronic address: dclift@mrc-lmb.cam.ac.uk.
William A McEwanMedical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Larisa I LabzinMedical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK.
Vera KoniecznyMax Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.
Binyam MogessieMax Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.
Leo C JamesMedical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK. Electronic address: lcj@mrc-lmb.cam.ac.uk.
Melina SchuhMedical Research Council, Laboratory of Molecular Biology, Cambridge CB2 0QH, UK; Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany. Electronic address: melina.schuh@mpibpc.mpg.de.
Max Planck Institute for Biophysical Chemistry · DEMedical Research Council · GBMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105181010Medical Research Council MC_U105192711Wellcome Trust 206248/Z/17/Z
6 · The paper itself

Abstract

Methods for the targeted disruption of protein function have revolutionized science and greatly expedited the systematic characterization of genes. Two main approaches are currently used to disrupt protein function: DNA knockout and RNA interference, which act at the genome and mRNA level, respectively. A method that directly alters endogenous protein levels is currently not available. Here, we present Trim-Away, a technique to degrade endogenous proteins acutely in mammalian cells without prior modification of the genome or mRNA. Trim-Away harnesses the cellular protein degradation machinery to remove unmodified native proteins within minutes of application. This rapidity minimizes the risk that phenotypes are compensated and that secondary, non-specific defects accumulate over time. Because Trim-Away utilizes antibodies, it can be applied to a wide range of target proteins using off-the-shelf reagents. Trim-Away allows the study of protein function in diverse cell types, including non-dividing primary cells where genome- and RNA-targeting methods are limited.

Indexed as

Protein TransportProteolysisAnimalsAntibodiesBiochemistryAntibodiesantibodiescell divisionCRISPR/Cas9macrophagesmeiosisoocytesprimary cellsprotein degradationprotein knockdownRNAi

Identifiers

PMID29153837
PMCPMC5733393
OpenAlexW2769995426

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.