Evidence map›Paper›PMID 29151899›Full record

ArticleMobile DNA2017

Globular domain structure and function of restriction-like-endonuclease LINEs: similarities to eukaryotic splicing factor Prp8.

M Murshida Mahbub, Saiful M Chowdhury, Shawn M Christensen

Abstract read
In one paragraph

Article in Mobile DNA, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

M Murshida MahbubDepartment of Biology, University of Texas at Arlington, 501 S. Nedderman Drive, Room 337, Arlington, TX 76010 USA.
Saiful M ChowdhuryDepartment of Chemistry and Biochemistry, University of Texas at Arlington, 700 Planetarium Place, Room 130, Arlington, TX 76010 USA.
Shawn M ChristensenDepartment of Biology, University of Texas at Arlington, 501 S. Nedderman Drive, Room 337, Arlington, TX 76010 USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundR2 elements are a clade of early branching Long Interspersed Elements (LINEs). LINEs are retrotransposable elements whose replication can have profound effects on the genomes in which they reside. No crystal or EM structures exist for the reverse transcriptase (RT) and linker regions of LINEs.

resultsUsing limited proteolysis as a probe for globular domain structure, we show that the protein encoded by the

conclusionsThe protein encoded by RLE LINEs consists of two major globular domains. The larger of the two globular domain contains the RT, linker, and RLE and is similar to the large fragment of the spliceosomal protein Prp8. The similarities are suggestive of possible common ancestry.

Indexed as

LineNon-LTR retrotransposonReverse transcriptaseRNA splicingTarget primed reverse transcription (TPRT)Transposable element (TE)

Identifiers

PMID29151899
PMCPMC5678591

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.