Evidence map›Paper›PMID 29150330›Full record

ArticleEuropean journal of medicinal chemistry2018

The structural requirements of histone deacetylase inhibitors: C4-modified SAHA analogs display dual HDAC6/HDAC8 selectivity.

Ahmed T Negmeldin, Joseph R Knoff, Mary Kay H Pflum

Open access · greenAbstract read
In one paragraph

Article in European journal of medicinal chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 46 citations in OpenAlex.

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  11. Discovery of secondary sulphonamides as IDO1 inhibitors with potent antitumour effectsJournal of enzyme inhibition and medicinal chemistry · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Ahmed T NegmeldinDepartment of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, United States; Department of Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Cairo University, Cairo 11562, Egypt.
Joseph R KnoffDepartment of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, United States.
Mary Kay H PflumDepartment of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, United States. Electronic address: pflum@wayne.edu.
Wayne State University · USCairo University · EG

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI PAUL M STEMMER · 1985 to 2026
$68.4M
Identification of Histone Deacetylase Substrates using Trapping MutantsR01GM121061 · NIGMS · WAYNE STATE UNIVERSITY · PI PFLUM, MARY KAY H · 2016 to 2018
$829k
NCI NIH HHS P30 CA022453NIGMS NIH HHS R01 GM121061
6 · The paper itself

Abstract

Histone deacetylase (HDAC) enzymes govern the post-translational acetylation state of lysine residues on protein substrates, leading to regulatory changes in cell function. Due to their role in cancers, HDAC proteins have emerged as promising targets for cancer treatment. Four HDAC inhibitors have been approved as anti-cancer therapeutics, including SAHA (Suberoylanilide hydroxamic acid, Vorinostat, Zolinza). SAHA is a nonselective HDAC inhibitor that targets most of the eleven HDAC isoforms. The nonselectivity of SAHA might account for its clinical side effects, but certainly limits its use as a chemical tool to study cancer-related HDAC cell biology. Herein, the nonselective HDAC inhibitor SAHA was modified at the C4 position of the linker to explore activity and selectivity. Several C4-modified SAHA analogs exhibited dual HDAC6/8 selectivity. Interestingly, (R)-C4-benzyl SAHA displayed 520- to 1300-fold selectivity for HDAC6 and HDAC8 over HDAC1, 2, and 3, with IC

Indexed as

Cell ProliferationDose-Response Relationship, DrugHeLa CellsHistone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesHumansHydroxamic AcidsJurkat CellsModels, MolecularMolecular StructureRepressor ProteinsStructure-Activity RelationshipU937 CellsVorinostatHDAC6 protein, humanHDAC8 protein, humanHistone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsRepressor ProteinsVorinostatDual HDAC6/HDAC8 selective inhibitorHDAC inhibitorHDAC isoform selectivityHistone deacetylaseSAHA (Vorinostat)

Identifiers

PMID29150330
PMCPMC5890937
OpenAlexW4254678331

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.