Evidence map›Paper›PMID 29149552›Full record

ArticleACS nano2017

Predicting Nano-Bio Interactions by Integrating Nanoparticle Libraries and Quantitative Nanostructure Activity Relationship Modeling.

Wenyi Wang, Alexander Sedykh, Hainan Sun, Linlin Zhao, Daniel P Russo, Hongyu Zhou, Bing Yan, Hao Zhu

Abstract read
In one paragraph

Article in ACS nano, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Development potential of nanoenabled agriculture projected using machine learning.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Frontiers in molecular biosciences · 2022
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wenyi WangThe Rutgers Center for Computational and Integrative Biology , Camden, New Jersey 08102, United States.ORCID 0000-0001-5641-2205
Alexander SedykhThe Rutgers Center for Computational and Integrative Biology , Camden, New Jersey 08102, United States.
Hainan SunSchool of Environmental Science and Engineering, Shandong University , Jinan 250100, China.
Linlin ZhaoThe Rutgers Center for Computational and Integrative Biology , Camden, New Jersey 08102, United States.
Daniel P RussoThe Rutgers Center for Computational and Integrative Biology , Camden, New Jersey 08102, United States.
Hongyu ZhouSchool of Environment, Jinan University , Guangzhou 510632, China.
Bing YanSchool of Environmental Science and Engineering, Shandong University , Jinan 250100, China.ORCID 0000-0002-7970-6764
Hao ZhuThe Rutgers Center for Computational and Integrative Biology , Camden, New Jersey 08102, United States.

Funding

Translational Research Support CoreP30ES005022 · NIEHS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI ROBERT John LAUMBACH · 1988 to 2026
$47.4M
Predictive Computational Acute Toxicity Modeling by Profiling Chemicals With PublR15ES023148 · NIEHS · RUTGERS THE STATE UNIV OF NJ CAMDEN · PI ZHU, HAO · 2013 to 2018
$941k
NIEHS NIH HHS P30 ES005022NIEHS NIH HHS R15 ES023148
6 · The paper itself

Abstract

The discovery of biocompatible or bioactive nanoparticles for medicinal applications is an expensive and time-consuming process that may be significantly facilitated by incorporating more rational approaches combining both experimental and computational methods. However, it is currently hindered by two limitations: (1) the lack of high-quality comprehensive data for computational modeling and (2) the lack of an effective modeling method for the complex nanomaterial structures. In this study, we tackled both issues by first synthesizing a large library of nanoparticles and obtained comprehensive data on their characterizations and bioactivities. Meanwhile, we virtually simulated each individual nanoparticle in this library by calculating their nanostructural characteristics and built models that correlate their nanostructure diversity to the corresponding biological activities. The resulting models were then used to predict and design nanoparticles with desired bioactivities. The experimental testing results of the designed nanoparticles were consistent with the model predictions. These findings demonstrate that rational design approaches combining high-quality nanoparticle libraries, big experimental data sets, and intelligent computational models can significantly reduce the efforts and costs of nanomaterial discovery.

Indexed as

Models, ChemicalBiocompatible MaterialsCell Line, TumorGoldHEK293 CellsHeme Oxygenase-1HumansNanostructuresStructure-Activity RelationshipSurface PropertiesBiocompatible MaterialsGoldHeme Oxygenase-1HMOX1 protein, humancellular uptakemodel predictionsnanomaterial designnanoparticle libraryQNAR modelingvirtual simulations

Identifiers

PMID29149552
PMCPMC5772766

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.