Evidence map›Paper›PMID 29146913›Full record

ArticleNature communications2017

Autophagy acts through TRAF3 and RELB to regulate gene expression via antagonism of SMAD proteins.

Alice C Newman, Alain J Kemp, Yvette Drabsch, Christian Behrends, Simon Wilkinson

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 35 citations in OpenAlex.

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  12. Role of AMPK in autophagy.Frontiers in physiology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Alice C NewmanEdinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XR, UK.ORCID http://orcid.org/0000-0002-8005-3801
Alain J KempEdinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XR, UK.
Yvette DrabschEdinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XR, UK.
Christian BehrendsMunich Cluster for Systems Neurology (SyNergy), Ludwig-Maximilians-University, Feodor-Lynen-Str. 17, 81377, Munich, Germany.ORCID http://orcid.org/0000-0002-9184-7607
Simon WilkinsonEdinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XR, UK. simon.wilkinson@igmm.ed.ac.uk.ORCID http://orcid.org/0000-0003-1082-8218
Edinburgh Cancer Research · GBGoethe University Frankfurt · DE

Funding

Cancer Research UK 12825Cancer Research UK C20685/A12825
6 · The paper itself

Abstract

Macroautophagy can regulate cell signalling and tumorigenesis via elusive molecular mechanisms. We establish a RAS mutant cancer cell model where the autophagy gene ATG5 is dispensable in A549 cells in vitro, yet promotes tumorigenesis in mice. ATG5 represses transcriptional activation by the TGFβ-SMAD gene regulatory pathway. However, autophagy does not terminate cytosolic signal transduction by TGFβ. Instead, we use proteomics to identify selective degradation of the signalling scaffold TRAF3. TRAF3 autophagy is driven by RAS and results in activation of the NF-κB family member RELB. We show that RELB represses TGFβ target promoters independently of DNA binding at NF-κB recognition sequences, instead binding with SMAD family member(s) at SMAD-response elements. Thus, autophagy antagonises TGFβ gene expression. Finally, autophagy-deficient A549 cells regain tumorigenicity upon SMAD4 knockdown. Thus, at least in this setting, a physiologic function for autophagic regulation of gene expression is tumour growth.

Indexed as

Gene Expression Regulation, NeoplasticA549 CellsAnimalsAutophagyCells, CulturedFemaleHEK293 CellsHumansLung NeoplasmsMiceSmad ProteinsTNF Receptor-Associated Factor 3Transcription Factor RelBTransforming Growth Factor betaTransplantation, HeterologousSmad ProteinsTNF Receptor-Associated Factor 3Transcription Factor RelBTransforming Growth Factor beta

Identifiers

PMID29146913
PMCPMC5691083
OpenAlexW2767716244

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.