Evidence map›Paper›PMID 29145494›Full record

ArticlePloS one2017

Global analysis of gene expression mediated by OX1 orexin receptor signaling in a hypothalamic cell line.

Eric Koesema, Thomas Kodadek

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. A molecular network map of orexin-orexin receptor signaling system.Journal of cell communication and signaling · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Eric KoesemaDepartment of Chemistry, The Scripps Research Institute, Scripps Florida, Jupiter, FL, United States of America.
Thomas KodadekDepartment of Chemistry, The Scripps Research Institute, Scripps Florida, Jupiter, FL, United States of America.ORCID http://orcid.org/0000-0003-1930-4795
Scripps Research Institute · US

Funding

Discovery of Potent Proteasome Agonists to Improve ProteostasisR21AG054892 · NIA · SCRIPPS FLORIDA · PI KODADEK, THOMAS J. · 2017 to 2018
$523k
NIA NIH HHS R21 AG054892
6 · The paper itself

Abstract

The orexins and their cognate G-protein coupled receptors have been widely studied due to their associations with various behaviors and cellular processes. However, the detailed downstream signaling cascades that mediate these effects are not completely understood. We report the generation of a neuronal model cell line that stably expresses the OX1 orexin receptor (OX1) and an RNA-Seq analysis of changes in gene expression seen upon receptor activation. Upon treatment with orexin, several families of related transcription factors are transcriptionally regulated, including the early growth response genes (Egr), the Kruppel-like factors (Klf), and the Nr4a subgroup of nuclear hormone receptors. Furthermore, some of the transcriptional effects observed have also been seen in data from in vivo sleep deprivation microarray studies, supporting the physiological relevance of the data set. Additionally, inhibition of one of the most highly regulated genes, serum and glucocorticoid-regulated kinase 1 (Sgk1), resulted in the diminished orexin-dependent induction of a subset of genes. These results provide new insight into the molecular signaling events that occur during OX1 signaling and support a role for orexin signaling in the stimulation of wakefulness during sleep deprivation studies.

Indexed as

Signal TransductionAnimalsCell LineCHO CellsCricetulusGene ExpressionHippocampusHumansOrexin ReceptorsOrexinsSequence Analysis, RNASleep DeprivationTranscription FactorsOrexin ReceptorsOrexinsTranscription Factors

Identifiers

PMID29145494
PMCPMC5690679
OpenAlexW2768314114

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.