Evidence map›Paper›PMID 29145394›Full record

ArticlePLoS genetics2017

UNC-16/JIP3 regulates early events in synaptic vesicle protein trafficking via LRK-1/LRRK2 and AP complexes.

Bikash Choudhary, Madhushree Kamak, Neena Ratnakaran, Jitendra Kumar, Anjali Awasthi, Chun Li, Ken Nguyen, Kunihiro Matsumoto, Naoki Hisamoto, Sandhya P Koushika

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  3. Review
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  5. Article
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  8. Article
  9. Article
  10. Adaptor protein-3 produces synaptic vesicles that release phasic dopamine.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Biomolecules · 2023
    Review
  12. Article
  13. Article
  14. Selective motor activation in organelle transport along axons.Nature reviews. Molecular cell biology · 2022
    Review
  15. Article
  16. Imaging Intracellular Trafficking in Neurons of C. elegans.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Bikash ChoudharyNational Centre for Biological Sciences-Tata Institute of Fundamental Research, Bangalore, Karnataka, India.
Madhushree KamakDepartment of Biological Sciences, Tata Institute of Fundamental Research, Mumbai, Maharashtra, India.
Neena RatnakaranDepartment of Biological Sciences, Tata Institute of Fundamental Research, Mumbai, Maharashtra, India.ORCID http://orcid.org/0000-0003-4848-4684
Jitendra KumarNational Centre for Biological Sciences-Tata Institute of Fundamental Research, Bangalore, Karnataka, India.
Anjali AwasthiNational Centre for Biological Sciences-Tata Institute of Fundamental Research, Bangalore, Karnataka, India.
Chun LiGroup of Signaling Mechanisms, Nagoya University, Nagoya, Japan.
Ken NguyenCenter for C. elegans Anatomy, Albert Einstein College of Medicine, New York, New York, United States of America.
Kunihiro MatsumotoGroup of Signaling Mechanisms, Nagoya University, Nagoya, Japan.
Naoki HisamotoGroup of Signaling Mechanisms, Nagoya University, Nagoya, Japan.
Sandhya P KoushikaDepartment of Biological Sciences, Tata Institute of Fundamental Research, Mumbai, Maharashtra, India.ORCID http://orcid.org/0000-0002-1742-7356
Tata Institute of Fundamental Research · INNagoya University · JPAlbert Einstein College of Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

JIP3/UNC-16/dSYD is a MAPK-scaffolding protein with roles in protein trafficking. We show that it is present on the Golgi and is necessary for the polarized distribution of synaptic vesicle proteins (SVPs) and dendritic proteins in neurons. UNC-16 excludes Golgi enzymes from SVP transport carriers and facilitates inclusion of specific SVPs into the same transport carrier. The SVP trafficking roles of UNC-16 are mediated through LRK-1, whose localization to the Golgi is reduced in unc-16 animals. UNC-16, through LRK-1, also enables Golgi-localization of the μ-subunit of the AP-1 complex. AP1 regulates the size but not the composition of SVP transport carriers. Additionally, UNC-16 and LRK-1 through the AP-3 complex regulates the composition but not the size of the SVP transport carrier. These early biogenesis steps are essential for dependence on the synaptic vesicle motor, UNC-104 for axonal transport. Our results show that UNC-16 and its downstream effectors, LRK-1 and the AP complexes function at the Golgi and/or post-Golgi compartments to control early steps of SV biogenesis. The UNC-16 dependent steps of exclusion, inclusion and motor recruitment are critical for polarized distribution of neuronal cargo.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAxonal TransportCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsDendritesGolgi ApparatusLeucine-Rich Repeat Serine-Threonine Protein Kinase-2NeuronsProtein Serine-Threonine KinasesProtein TransportSynaptic VesiclesTranscription Factor AP-1Adaptor Proteins, Signal TransducingCaenorhabditis elegans ProteinsCarrier ProteinsLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRK-1 protein, C elegansProtein Serine-Threonine KinasesTranscription Factor AP-1unc-16 protein, C elegans

Identifiers

PMID29145394
PMCPMC5716593
OpenAlexW2769791834

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.