ArticleNature immunology2017
Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data.
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In one paragraph
Article in Nature immunology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.
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102citing papers in PubMed
–field-weighted citation impact
What it found
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Who cites it
102 citing papers in PubMed.
- scXpand: Pan-cancer detection of T cell clonal expansion from single-cell RNA sequencing without paired single-cell TCR sequencing.Cell genomics · 2026Article
- A glycan-based adjuvant expands the breadth and duration of protection of mRNA-based vaccines.Nature immunology · 2026Article
- TCRBinder: Unified pre-trained language model with paired-chain synergy for predicting T-cell receptor binding specificity.PLoS computational biology · 2026Article
- High-throughput, quantitative approach to peptide epitope discovery.Medical & biological engineering & computing · 2026Article
- TCRcloud: a global visualization tool for T-cell and B-cell receptor transcripts.Journal of translational medicine · 2026Article
- The current landscape of adaptive immune receptor genomic and repertoire data: OGRDB and VDJbase.Nucleic acids research · 2026Article
- Article
- Challenges and future directions of AIRR-seq-based diagnostics.Immunoinformatics (Amsterdam, Netherlands) · 2025Article
- AnalyzAIRR: A user-friendly guided workflow for AIRR data analysis.Immunoinformatics (Amsterdam, Netherlands) · 2025Article
- Enhancing sequence alignment of adaptive immune receptors through multi-task deep learning.Nucleic acids research · 2025Article
- The BCR-SEQC initiative.Nature immunology · 2025Article
- Simulation of adaptive immune receptors and repertoires with complex immune information to guide the development and benchmarking of AIRR machine learning.Nucleic acids research · 2025Article
- Annotation of gene loci and analysis of expression diversity in sheep immunoglobulin.Frontiers in immunology · 2025Article
- Expression Cloning of Antibodies from Single Human B Cells.Methods in molecular biology (Clifton, N.J.) · 2025Article
- Comprehensive analysis of αβT-cell receptor repertoires reveals signatures of thymic selection.Frontiers in immunology · 2025Article
- Article
- Single-cell immune repertoire analysis.Nature methods · 2024Review
- Guidelines for reproducible analysis of adaptive immune receptor repertoire sequencing data.Briefings in bioinformatics · 2024Article
- Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes.Genome biology · 2024Article
- The multilevel extensive diversity across the cynomolgus macaque captured by ultra-deep adaptive immune receptor repertoire sequencing.Science advances · 2024Article
42 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
20 authors.
Florian RubeltDepartment of Microbiology and Immunology and Institute for Immunity, Transplantation and Infection, Stanford University School of Medicine, Stanford, California, USA.
Christian E BusseDivision of B Cell Immunology, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0001-7553-905X
Syed Ahmad Chan BukhariDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.
Jean-Philippe BürckertDepartment of Infection and Immunity, Luxembourg Institute of Health, Luxembourg, Luxembourg.
Encarnita Mariotti-FerrandizSorbonne Universités, UPMC Univ Paris 06, INSERM, UMR_S 959, Immunology-Immunopathology-Immunotherapy (i3), Paris, France.ORCID 0000-0002-8770-0186
Lindsay G CowellDepartment of Clinical Sciences, UT Southwestern Medical Center, Dallas, Texas, USA.
Corey T WatsonDepartment of Biochemistry and Molecular Genetics, University of Louisville School of Medicine, Louisville, Kentucky, USA.
Nishanth MarthandanDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada.
William J FaisonDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina, USA.
Uri HershbergSchool of Biomedical Engineering, Science & Health Systems, and Department of Microbiology and Immunology, College of Medicine, Drexel University, Philadelphia, Pennsylvania, USA.
Uri LasersonDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Brian D CorrieiReceptor, Simon Fraser University, Burnaby, British Columbia, Canada.
Mark M DavisDepartment of Microbiology and Immunology and Institute for Immunity, Transplantation and Infection, Stanford University School of Medicine, Stanford, California, USA.
Bjoern PetersLa Jolla Institute for Allergy and Immunology, La Jolla, California, USA.ORCID 0000-0002-8457-6693
Marie-Paule LefrancIMGT, the international ImMunoGeneTics information system, LIGM, Institut de Génétique Humaine IGH, CNRS, University of Montpellier, Montpellier, France.
Jamie K ScottDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada.
Felix BredeniReceptor, Simon Fraser University, Burnaby, British Columbia, Canada.
AIRR Community
Eline T Luning PrakDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0002-9478-9211
Steven H KleinsteinDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.
Funding
Using a tonsil organoid system to probe conditions for the induction of protective antibody and T cell responses to influenza.U19AI057229 · NIAID · STANFORD UNIVERSITY · PI Mark Morris Davis · 2003 to 2026
$88.5MCOMPUTATIONAL TOOLS FOR THE ANALYSIS OF HIGH-THROUGHPUT IMMUNOGLOBULIN SEQUENCING EXPERIMENTSR01AI104739 · NIAID · YALE UNIVERSITY · PI KLEINSTEIN, STEVEN H. · 2014 to 2022
$3.6MRepServer: Antigen Receptor Repertoire Analysis Pipelines via the WWWR01AI097403 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI COWELL, LINDSAY G. · 2012 to 2016
$3.2MMURINE T-CELL RECEPTOR STRUCTURE AND RECOGNITIONR37AI022511 · NIAID · STANFORD UNIVERSITY · PI DAVIS, MARK MORRIS · 1995 to 2004
$1.3MNIAID NIH HHS R01 AI097403NIAID NIH HHS R01 AI104739NIAID NIH HHS R37 AI022511NIAID NIH HHS U19 AI057229
Abstract
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Indexed as
Information DisseminationAnimalsDatasets as TopicHumansReceptors, ImmunologicResearch DesignReceptors, Immunologic
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.