Evidence map›Paper›PMID 29143984›Full record

ArticleJournal of cellular biochemistry2018

CRISPR/Cas9-mediated knockout of Lim-domain only four retards organ of Corti cell growth.

Rajamani Rathinam, Rita Rosati, Samson Jamesdaniel

Abstract read
In one paragraph

Article in Journal of cellular biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Genes · 2023
    Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Rajamani RathinamInstitute of Environmental Health Sciences, Wayne State University, Detroit, Michigan.
Rita RosatiInstitute of Environmental Health Sciences, Wayne State University, Detroit, Michigan.
Samson JamesdanielInstitute of Environmental Health Sciences, Wayne State University, Detroit, Michigan.ORCID 0000-0002-5269-9007
Wayne State University · US

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI Julie Lynn Boerner · 1985 to 2026
$68.4M
Pilot Project ProgramP30ES020957 · NIEHS · WAYNE STATE UNIVERSITY · PI RUDEN, DOUGLAS M · 2014 to 2021
$10.1M
Heavy metal exposure, genetic predisposition, and auditory dysfunction: A cross-sectional study in a high-risk urban cohortK01ES028750 · NIEHS · WAYNE STATE UNIVERSITY · PI JAMESDANIEL, SAMSON · 2018 to 2020
$394k
NCI NIH HHS P30 CA022453NIEHS NIH HHS K01 ES028750NIEHS NIH HHS P30 ES020957
6 · The paper itself

Abstract

Lim-domain only 4 (LMO4) plays a critical role in mediating the ototoxic side-effects of cisplatin, a highly effective anti-cancer drug. However, the signaling mechanism by which cochlear LMO4 mediates otopathology is yet to be fully understood. Knockout cell culture models are useful tools for investigating the functional roles of novel genes and delineating associated signaling pathways. Therefore, LMO4 knockout organ of Corti cells were generated by using the CRISPR (clustered regularly interspersed short palindromic repeats)/Cas9 (CRISPR-associated protein 9) system. Successful knockout of LMO4 in UB/OC1 cells was verified by the absence of LMO4 protein bands in immunoblots. Though the Knockout of LMO4 retarded the growth rate and the migratory potential of the cells it did not inhibit their long-term viability as the LMO4 knockout UB/OC1 cells were able to survive, proliferate, and form colonies. In addition, the knockout of LMO4 did not alter the expression of myosin VIIa, a biomarker of hair cells, suggesting that the knockout cells retain important characteristic features of cochlear sensory receptor cells. Thus, the findings of this study indicate that CRISPR/Cas9 system is a simple and versatile method for knocking out genes of interest in organ of Corti cells and that LMO4 knockout UB/OC1 cells are viable experimental models for studying the functional role of LMO4 in ototoxicity.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAntineoplastic AgentsCell ProliferationCisplatinCRISPR-Cas SystemsImmunoblottingImmunohistochemistryLIM Domain ProteinsMiceSignal TransductionWound HealingAdaptor Proteins, Signal TransducingAntineoplastic AgentsCisplatinLIM Domain ProteinsLmo4 protein, mousecisplatincochleahearing lossLMO4ototoxicity

Identifiers

PMID29143984
PMCPMC6366322
OpenAlexW2770252385

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.