Evidence map›Paper›PMID 29143605›Full record

ArticleBMC plant biology2017

Impact of the 7-bp deletion in HvGA20ox2 gene on agronomic important traits in barley (Hordeum vulgare L.).

Serafima Teplyakova, Marina Lebedeva, Nadezhda Ivanova, Valentina Horeva, Nina Voytsutskaya, Olga Kovaleva, Elena Potokina

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Determination of the Allelic Composition of thePlants (Basel, Switzerland) · 2024
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  3. Article
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  5. Review
  6. Article
  7. Genetic dissection of the interactions between semi-dwarfing genesMolecular breeding : new strategies in plant improvement · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Serafima TeplyakovaSaint Petersburg State University, Universitetskaya emb.7/9, St. Petersburg, 199034, Russia.
Marina LebedevaN.I. Vavilov Institute of Plant Genetic Resources (VIR), Bolshaya Morskaya, 42-44, 190000, St. Petersburg, Russia.
Nadezhda IvanovaN.I. Vavilov Institute of Plant Genetic Resources (VIR), Bolshaya Morskaya, 42-44, 190000, St. Petersburg, Russia.
Valentina HorevaN.I. Vavilov Institute of Plant Genetic Resources (VIR), Bolshaya Morskaya, 42-44, 190000, St. Petersburg, Russia.
Nina VoytsutskayaN.I. Vavilov Institute of Plant Genetic Resources (VIR), Bolshaya Morskaya, 42-44, 190000, St. Petersburg, Russia.
Olga KovalevaN.I. Vavilov Institute of Plant Genetic Resources (VIR), Bolshaya Morskaya, 42-44, 190000, St. Petersburg, Russia.
Elena PotokinaSaint Petersburg State University, Universitetskaya emb.7/9, St. Petersburg, 199034, Russia. e.potokina@vir.nw.ru.
N.I. Vavilov Research Institute of Plant Industry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAlike to Reduced height-1 (Rht-1) genes in wheat and the semi dwarfing (sd-1) gene in rice, the sdw1/denso locus involved in the metabolism of the GA, was designated as the 'Green Revolution' gene in barley. The recent molecular characterization of the candidate gene HvGA20ox2 for sdw1/denso locus allows to estimate the impact of the functional polymorphism of this gene on the variation of agronomically important traits in barley.

resultsWe investigated the effect of the 7-bp deletion in exon 1 of HvGA20ox2 gene (sdw1.d mutation) on the variation of yield-related and malting quality traits in the population of DHLs derived from cross of medium tall barley Morex and semi-dwarf barley Barke. Segregation of plant height, flowering time, thousand grain weight, grain protein content and grain starch was evaluated in two diverse environments separated from one another by 15° of latitude. The 7-bp deletion in HvGA20ox2 gene reduced plant height by approximately 13 cm and delayed flowering time by 3-5 days in the barley segregating DHLs population independently on environmental cue. On other hand, the sdw1.d mutation did not affect significantly either grain quality traits (protein and starch content) or thousand grain weight.

conclusionsThe beneficial effect of the sdw1.d allele could be associated in barley with lodging resistance and extended period of vegetative growth allowing to accumulate additional biomass that supports higher yield in certain environments. However, no direct effect of the sdw1.d mutation on thousand grain weight or grain quality traits in barley was detected.

Indexed as

Genes, PlantSequence DeletionChromosome MappingChromosomes, PlantDNA, PlantEdible GrainHordeumMixed Function OxygenasesPhenotypePlant BreedingPolymorphism, GeneticQuantitative Trait LociSeedsSequence Analysis, DNAStarchDNA, Plantgibberellin, 2-oxoglutarate-oxygen oxidoreductase (20-hydroxylating, oxidizing)Mixed Function OxygenasesStarchFunctional polymorphismGrain protein contentHeading datePlant heightQTLsdw1/densoSemi-dwarf barleyThousand grain weight

Identifiers

PMID29143605
PMCPMC5688404
OpenAlexW2768592838

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.