Evidence map›Paper›PMID 29143601›Full record

ArticleBMC plant biology2017

Morphological description and DNA barcoding study of sand rice (Agriophyllum squarrosum, Chenopodiaceae) collected in Kazakhstan.

Yuliya Genievskaya, Saule Abugalieva, Aibatsha Zhubanysheva, Yerlan Turuspekov

Abstract read
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Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

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10citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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  7. Review
  8. Recent Progress on Chemical Production From Non-food Renewable Feedstocks UsingFrontiers in bioengineering and biotechnology · 2020
    Review
  9. Article
  10. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Yuliya GenievskayaInstitute of Plant Biology and Biotechnology, Almaty, Kazakhstan, 050040.
Saule AbugalievaInstitute of Plant Biology and Biotechnology, Almaty, Kazakhstan, 050040.
Aibatsha ZhubanyshevaAktobe breeding station, Aktobe region, Kazakhstan, 030014.
Yerlan TuruspekovInstitute of Plant Biology and Biotechnology, Almaty, Kazakhstan, 050040. yerlant@yahoo.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSand rice (Agriophyllum squarrosum (L.) Moq.) is an annual shrub-like plant adapted to the mobile sand dunes in desert and semi-desert regions of Asia. It has a balanced nutrient composition with relatively high concentration of lipids and proteins, which results in its nutrition being similar to legumes. Sand rice's proteins contain the full range of essential amino acids. However, calories content is more similar to wheat. These features together with desert stress resistance make sand rice a potential food crop resilient to ongoing climate change. It is also an important fodder crop (on young stages of growth) for cattle in arid regions of Kazakhstan. In our work, sand rice samples were collected from two distant regions of Kazakhstan as a part of the nation-wide project to determine genetic variation of the native flora.

resultsSamples were collected in western and southeastern parts of Kazakhstan separated by distances of up to 1300 km. Sequences of the nuclear ribosomal DNA ITS1-5.8S-ITS2 region and the chloroplast matK gene confirmed the identity of species defined by morphological traits. Comparison with GenBank sequences revealed polymorphic sequence positions among Kazakh populations and GenBank references, and suggested a distinction among local populations of sand rice. The phylogenetic analysis of nucleotide sequences showed a clear partition of A. squarrosum (L.) Moq. from Agriophyllum minus Fisch. & C.A. Mey, which grows in the same sand dunes environment.

conclusionsDNA barcoding analyses of ITS and matK sequences showed a segregation of A. squarrosum from A. minus into separate clades in Maximum-Likelhood dendrograms. ITS analysis can be successfully used to characterize A. squarrosum populations growing quite distant from each other. The data obtained in this work provide the basis for further investigations on A. squarrosum population structure and may play a role in the screening of sand rice plants growing in desert and semi-desert environments of Central Asia and China.

Indexed as

ChenopodiaceaeDNA Barcoding, TaxonomicDNA, ChloroplastDNA, PlantDNA, Ribosomal SpacerGenes, PlantGenetic VariationKazakhstanSpecies SpecificityDNA, ChloroplastDNA, PlantDNA, Ribosomal SpacerAgriophyllum minusAgriophyllum squarrosumDNA barcodingITSmatKSand riceShrub

Identifiers

PMID29143601
PMCPMC5688448

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.