Evidence map›Paper›PMID 29142318›Full record

ArticleNature communications2017

The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.

Chengzhang Fu, Asfandyar Sikandar, Jannik Donner, Nestor Zaburannyi, Jennifer Herrmann, Michael Reck, Irene Wagner-Döbler, Jesko Koehnke, Rolf Müller

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. MTHFD2: a promising metabolic checkpoint for diseases.Journal of translational medicine · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Targeting one-carbon metabolism for cancer immunotherapy.Clinical and translational medicine · 2024
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Metabolomics in oncology.Cancer reports (Hoboken, N.J.) · 2023
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Chengzhang FuDepartment of Microbial Natural Products, Helmholtz Centre for Infection Research and Department of Pharmaceutical Biotechnology, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Saarland University, Campus E8.1, 66123, Saarbrücken, Germany.
Asfandyar SikandarHelmholtz Institute for Pharmaceutical Research Saarland, Workgroup Structural Biology of Biosynthetic Enzymes, Helmholtz Centre for Infection Research, Saarland University, Campus E8.1, 66123, Saarbrücken, Germany.
Jannik DonnerHelmholtz Center for Infection Research (HZI), Group Microbial Communication, 38124, Braunschweig, Germany.ORCID http://orcid.org/0000-0002-1115-8714
Nestor ZaburannyiDepartment of Microbial Natural Products, Helmholtz Centre for Infection Research and Department of Pharmaceutical Biotechnology, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Saarland University, Campus E8.1, 66123, Saarbrücken, Germany.
Jennifer HerrmannDepartment of Microbial Natural Products, Helmholtz Centre for Infection Research and Department of Pharmaceutical Biotechnology, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Saarland University, Campus E8.1, 66123, Saarbrücken, Germany.
Michael ReckHelmholtz Center for Infection Research (HZI), Group Microbial Communication, 38124, Braunschweig, Germany.
Irene Wagner-DöblerHelmholtz Center for Infection Research (HZI), Group Microbial Communication, 38124, Braunschweig, Germany.
Jesko KoehnkeHelmholtz Institute for Pharmaceutical Research Saarland, Workgroup Structural Biology of Biosynthetic Enzymes, Helmholtz Centre for Infection Research, Saarland University, Campus E8.1, 66123, Saarbrücken, Germany. jesko.koehnke@helmholtz-hzi.de.ORCID http://orcid.org/0000-0002-7153-1365
Rolf MüllerDepartment of Microbial Natural Products, Helmholtz Centre for Infection Research and Department of Pharmaceutical Biotechnology, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Saarland University, Campus E8.1, 66123, Saarbrücken, Germany. rolf.mueller@helmholtz-hzi.de.
Helmholtz Centre for Infection Research · DEGerman Center for Infection Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The natural product carolacton is a macrolide keto-carboxylic acid produced by the myxobacterium Sorangium cellulosum, and was originally described as an antibacterial compound. Here we show that carolacton targets FolD, a key enzyme from the folate-dependent C1 metabolism. We characterize the interaction between bacterial FolD and carolacton biophysically, structurally and biochemically. Carolacton binds FolD with nanomolar affinity, and the crystal structure of the FolD-carolacton complex reveals the mode of binding. We show that the human FolD orthologs, MTHFD1 and MTHFD2, are also inhibited in the low nM range, and that micromolar concentrations of carolacton inhibit the growth of cancer cell lines. As mitochondrial MTHFD2 is known to be upregulated in cancer cells, it may be possible to use carolacton as an inhibitor tool compound to assess MTHFD2 as an anti-cancer target.

Indexed as

AminohydrolasesAnti-Bacterial AgentsAntineoplastic AgentsBacterial ProteinsBiofilmsBiological ProductsCell Line, TumorCrystallography, X-RayEnzyme AssaysFolic AcidFormate-Tetrahydrofolate LigaseHumansInhibitory Concentration 50MacrolidesMethylenetetrahydrofolate Dehydrogenase (NADP)Microbial Sensitivity TestsAminohydrolasesAnti-Bacterial AgentsAntineoplastic AgentsBacterial ProteinsBiological ProductscarolactonFolic AcidFormate-Tetrahydrofolate Ligaseformyl-methenyl-methylenetetrahydrofolate synthetaseMacrolidesMethylenetetrahydrofolate Dehydrogenase (NADP)Minor Histocompatibility AntigensMTHFD1 protein, humanMTHFD2 protein, humanMultienzyme ComplexesMultifunctional Enzymes

Identifiers

PMID29142318
PMCPMC5688156
OpenAlexW2768015497

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.