Evidence map›Paper›PMID 29142307›Full record

ArticleScientific reports2017

Genetic polymorphism related to monocyte-macrophage function is associated with graft-versus-host disease.

Kati Hyvärinen, Jarmo Ritari, Satu Koskela, Riitta Niittyvuopio, Anne Nihtinen, Liisa Volin, David Gallardo, Jukka Partanen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

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  8. Macrophage regulation of graft-World journal of clinical cases · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Kati HyvärinenFinnish Red Cross Blood Service, Helsinki, Finland. kati.hyvarinen@bloodservice.fi.ORCID 0000-0003-4605-2837
Jarmo RitariFinnish Red Cross Blood Service, Helsinki, Finland.
Satu KoskelaFinnish Red Cross Blood Service, Helsinki, Finland.
Riitta NiittyvuopioHelsinki University Hospital, Comprehensive Cancer Center, Stem Cell Transplantation Unit, Helsinki, Finland.
Anne NihtinenHelsinki University Hospital, Comprehensive Cancer Center, Stem Cell Transplantation Unit, Helsinki, Finland.
Liisa VolinHelsinki University Hospital, Comprehensive Cancer Center, Stem Cell Transplantation Unit, Helsinki, Finland.
David GallardoDepartment of Hematology, Institut Català d'Oncologia, Hospital Dr. Josep Trueta, Girona, Spain.
Jukka PartanenFinnish Red Cross Blood Service, Helsinki, Finland.ORCID 0000-0001-6681-4734
Finnish Red Cross · FIHelsinki University Hospital · FIInstitut Català d'Oncologia · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite detailed human leukocyte antigen (HLA) matching and modern immunosuppressive therapy, severe graft-versus-host disease (GvHD) remains a major hurdle for successful allogeneic hematopoietic stem cell transplantation (HSCT). As the genetic diversity in GvHD complicates the systematic discovery of associated variants across populations, we studied 122 GvHD-associated single nucleotide polymorphisms (SNPs) in 492 HLA-matched sibling HSCT donor-recipient pairs from Finland and Spain. The association between these candidate SNPs and grade III-IV acute GvHD and extensive chronic GvHD was assessed. The functional effects of the variants were determined using expression and cytokine quantitative trait loci (QTL) database analyses. Clear heterogeneity was observed in the associated markers between the two populations. Interestingly, the majority of markers, such as those annotated to IL1, IL23R, TLR9, TNF, and NOD2 genes, are related to the immunological response by monocytes-macrophages to microbes, a step that precedes GvHD as a result of intestinal lesions. Furthermore, cytokine QTL analysis showed that the GvHD-associated markers regulate IL1β, IFNγ, and IL6 responses. These results support a crucial role for the anti-microbial response in GvHD risk. Furthermore, despite apparent heterogeneity in the genetic markers associated with GvHD, it was possible to identify a biological pathway shared by most markers in both populations.

Indexed as

Genetic Association StudiesHematopoietic Stem Cell TransplantationAdolescentAdultCytokinesFemaleFinlandGraft vs Host DiseaseHLA AntigensHumansMacrophagesMaleMiddle AgedNod2 Signaling Adaptor ProteinPolymorphism, Single NucleotideQuantitative Trait LociCytokinesHLA AntigensIL23R protein, humanNOD2 protein, humanNod2 Signaling Adaptor ProteinReceptors, InterleukinToll-Like Receptor 9

Identifiers

PMID29142307
PMCPMC5688060
OpenAlexW2767487049

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.